LOCUS BC001450 2532 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens nuclear cap binding protein subunit 1, 80kDa, mRNA
(cDNA clone MGC:2087 IMAGE:3138757), complete cds.
ACCESSION BC001450
VERSION BC001450.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2532)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2532)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001450.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: f Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52851457.
FEATURES Location/Qualifiers
source 1..2532
/db_xref="H-InvDB:HIT000030423"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2087 IMAGE:3138757"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2532
/gene="NCBP1"
/gene_synonym="CBP80"
/gene_synonym="MGC2087"
/db_xref="GeneID:4686"
/db_xref="HGNC:HGNC:7658"
/db_xref="MIM:600469"
CDS 64..2436
/gene="NCBP1"
/gene_synonym="CBP80"
/gene_synonym="MGC2087"
/codon_start=1
/product="nuclear cap binding protein subunit 1, 80kDa"
/protein_id="AAH01450.1"
/db_xref="GeneID:4686"
/db_xref="HGNC:HGNC:7658"
/db_xref="MIM:600469"
/translation="MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSAC
SLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGG
EFVEAMIRQLKESLKANNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEED
VPQVRRDWYVYAFLSSLPWVGKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWT
ADKPHPQEEYLDCLWAQIQKLKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPH
TEDSVYPMPRVIFRMFDYTDDPEGPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAA
QLVSYPGKNKIPLNYHIVEVIFAELFQLPAPPHIDVMYTTLLIELCKLQPGSLPQVLA
QATEMLYMRLDTMNTTCVDRFINWFSHHLSNFQFRWSWEDWSDCLSQDPESPKPKFVR
EVLEKCMRLSYHQRILDIVPPTFSALCPANPTCIYKYGDESSNSLPGHSVALCLAVAF
KSKATNDEIFSILKDVPNPNQDDDDDEGFSFNPLKIEVFVQTLLHLAAKSFSHSFSAL
AKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQMIAVLVDKMIRTQIVDCAAVANWIF
SSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSD
RKDGVLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLVRCETDGTSVLTPWY
KNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILAVFQQFCALQA"
BASE COUNT 770 a 527 c 553 g 682 t
ORIGIN
1 ccagacagtt cctgcagcgc ttaccgcctg gcctctcggt tccgcggcgc accggagggc
61 agcatgtcgc ggcggcggca cagcgacgag aacgacggtg ggcagcctca caaaaggaga
121 aagacctctg atgcaaatga aactgaagat catttggaat ctttaatatg taaagtagga
181 gaaaagagtg cctgctcttt ggagagcaac ctagaaggct tggctggtgt tttggaagct
241 gatcttccta actacaagag caagatctta aggcttcttt gtacagttgc acgcctatta
301 cctgagaagc tgacaattta tacaacatta gttggactac tgaatgccag gaattacaat
361 tttggtggag aatttgtaga agccatgatt cgtcaactta aagaatcatt gaaagcaaac
421 aattataatg aagccgtgta tttggtccgt tttttatctg atcttgtgaa ttgtcatgtg
481 attgccgccc catcaatggt tgctatgttt gaaaattttg taagcgtaac tcaggaagaa
541 gatgtacctc aggtgcgacg agattggtat gtgtatgcat ttctgtcatc tttgccctgg
601 gttggaaagg agttgtacga aaagaaagat gcagagatgg accgcatctt tgccaacact
661 gaaagctatc ttaaaagacg ccaaaagact catgtaccca tgttacaggt atggactgct
721 gataaaccac atccacaaga agagtattta gattgcctgt gggcccagat tcagaaattg
781 aaaaaggatc gctggcagga acggcacatc ctaagacctt atcttgcctt tgacagcatc
841 ctgtgtgaag cactgcagca caatctgcct ccttttacac cacctcctca cactgaagat
901 tcagtgtacc caatgccaag ggtcatcttc agaatgtttg attacacaga tgatcccgag
961 ggtcctgtca tgccagggag tcattcagtg gaaagatttg taatagaaga gaatcttcac
1021 tgcatcatta agtcccactg gaaggaaagg aagacttgtg ctgcacagtt agtgagctat
1081 ccagggaaga acaagatccc cttgaactac cacatagttg aggtgatctt tgcagagctg
1141 tttcaacttc cagcaccccc tcacattgat gtgatgtaca caacactcct cattgaactg
1201 tgcaaacttc aacctggctc tctaccccaa gttcttgcac aggcaactga aatgctatac
1261 atgcgtttgg acacaatgaa cactacctgt gtagacaggt ttattaattg gttttctcat
1321 catctaagta acttccagtt ccgttggagc tgggaagatt ggtcagattg tcttagtcaa
1381 gatcctgaaa gtcccaaacc gaagtttgta agagaagttc tagaaaaatg tatgaggttg
1441 tcttaccatc agcgtatatt agatattgtt cctcctacct tctcagctct gtgtcctgca
1501 aacccaacct gcatttacaa gtatggagat gaaagtagca attctcttcc tggacattct
1561 gttgccctct gtttagctgt tgcctttaaa agtaaggcaa ccaatgatga aatcttcagc
1621 attctgaaag atgtaccaaa tcctaaccag gatgatgacg acgatgaagg attcagtttt
1681 aacccattga aaatagaagt ctttgtacag actctgctac acttggcagc caaatcattc
1741 agccactcct tcagtgctct tgcaaagttt catgaagtct tcaaaaccct agctgaaagt
1801 gatgaaggaa agttacatgt gctaagagtt atgtttgagg tctggaggaa ccatccacag
1861 atgattgctg tactagtgga taagatgatt cgtacacaaa tagttgattg tgctgccgta
1921 gcaaattgga tcttctcttc agaactatct cgtgacttta ccagattgtt tgtttgggaa
1981 attttgcact ctacaattcg taagatgaac aaacatgtcc tgaagatcca gaaagagctg
2041 gaagaagcta aagagaaact tgctaggcaa cacaaacggc gaagtgatga tgacgacaga
2101 agcagtgaca ggaaagacgg ggttcttgag gaacaaatag aacgacttca ggaaaaagtg
2161 gaatctgctc agagtgaaca aaagaatctt ttcctcgtta tatttcagcg gtttatcatg
2221 atcttgaccg agcacctagt acgatgcgaa actgatggga ccagtgtatt aacaccatgg
2281 tataagaact gtatagagag gctgcagcag atcttcctac agcatcacca aataatccag
2341 cagtacatgg tgaccctgga gaaccttctc ttcactgctg aattagaccc tcatatcttg
2401 gccgtgttcc agcagttctg tgccctgcag gcctaagggt cattttttcc tcatgtcaag
2461 gttttttttg atatcttaaa ataatttgtc ttataaaaaa aaaaaaaaaa aaaaaaaaaa
2521 aaaaaaaaaa aa
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