LOCUS BC001411 900 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 34kDa, V1 subunit
D, mRNA (cDNA clone MGC:657 IMAGE:3140126), complete cds.
ACCESSION BC001411
VERSION BC001411.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 900)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 900)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001411.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: g Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19913437.
FEATURES Location/Qualifiers
source 1..900
/db_xref="H-InvDB:HIT000030391"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:657 IMAGE:3140126"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..900
/gene="ATP6V1D"
/gene_synonym="VATD"
/gene_synonym="VMA8"
/db_xref="GeneID:51382"
/db_xref="HGNC:HGNC:13527"
/db_xref="MIM:609398"
CDS 85..828
/gene="ATP6V1D"
/gene_synonym="VATD"
/gene_synonym="VMA8"
/codon_start=1
/product="ATPase, H+ transporting, lysosomal 34kDa, V1
subunit D"
/protein_id="AAH01411.1"
/db_xref="GeneID:51382"
/db_xref="HGNC:HGNC:13527"
/db_xref="MIM:609398"
/translation="MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRF
RQILKKIIETKMLMGEVMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVA
GVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDE
AIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFYRLKKIQEKKKILKEKSEK
DLEQRRAAGEVLEPANLLAEEKDEDLLFE"
BASE COUNT 303 a 162 c 221 g 214 t
ORIGIN
1 ggaagacact gtggaggcca gttctggagc tattgcagcc tcggttgccc ggccggggac
61 ccgagccgaa aagttatcgt cagaatgtcg ggcaaagacc gaattgaaat ctttccctcg
121 cgaatggcac agaccatcat gaaggctcgt ttaaagggag cacagacagg tcgaaacctc
181 ctgaagaaaa aatctgatgc cttaactctt cgatttcgac agatcctaaa gaagataata
241 gagactaaaa tgttgatggg cgaagtgatg agagaagctg ccttttcact agctgaagcc
301 aagttcacag caggtgactt cagcactaca gttatccaaa atgtcaataa agcgcaagtg
361 aagattcgag cgaagaaaga taatgtagca ggtgttactt tgccagtatt tgaacattac
421 catgaaggaa ctgacagtta tgaactgact ggtttagcca gaggtgggga acagttggct
481 aaattaaaga ggaattatgc caaagcagtg gaactactgg tggaactagc ttctctgcag
541 acttcttttg ttactttgga tgaagctatt aagataacca acaggcgtgt aaatgccatt
601 gaacatgtca tcattccccg gattgaacgt actcttgctt atatcatcac agagctggat
661 gagagagagc gagaagagtt ctataggtta aagaaaatac aagagaagaa aaagattcta
721 aaggaaaaat ctgagaagga cttggagcaa aggagagcag ctggagaggt gttggagcct
781 gctaatcttc tggctgaaga gaaggacgag gatcttctat ttgaataatc tttcctgttc
841 tggttctttg agaaacccta acactggctt cattttaaaa aaaaaaaaaa aaaaaaaaaa
//