LOCUS BC001405 1399 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens uridine phosphorylase 1, mRNA (cDNA clone MGC:1588
IMAGE:3140458), complete cds.
ACCESSION BC001405
VERSION BC001405.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1399)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1399)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: e Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31742506.
FEATURES Location/Qualifiers
source 1..1399
/db_xref="H-InvDB:HIT000030385"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1588 IMAGE:3140458"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1399
/gene="UPP1"
/gene_synonym="UDRPASE"
/gene_synonym="UPASE"
/gene_synonym="UPP"
/db_xref="GeneID:7378"
/db_xref="HGNC:HGNC:12576"
/db_xref="MIM:191730"
CDS 381..1313
/gene="UPP1"
/gene_synonym="UDRPASE"
/gene_synonym="UPASE"
/gene_synonym="UPP"
/codon_start=1
/product="uridine phosphorylase 1"
/protein_id="AAH01405.1"
/db_xref="GeneID:7378"
/db_xref="HGNC:HGNC:12576"
/db_xref="MIM:191730"
/translation="MAATGANAEKAESHNDCPVRLLNPNIAKMKEDILYHFNLTTSRH
NFPALFGDVKFVCVGGSPSRMKAFIRCVGAELGLDCPGRDYPNICAGTDRYAMYKVGP
VLSVSHGMGIPSISIMLHELIKLLYYARCSNVTIIRIGTSGGIGLEPGTVVITEQAVD
TCFKAEFEQIVLGKRVIRKTDLNKKLVQELLLCSAELSEFTTVVGNTMCTLDFYEGQG
RLDGALCSYTEKDKQAYLEAAYAAGVRNIEMESSVFAAMCSACGLQAAVVCVTLLNRL
EGDQISSPRNVLSEYQQRPQRLVSYFIKKKLSKA"
BASE COUNT 310 a 389 c 406 g 294 t
ORIGIN
1 tgagattcac ctcgcaagtg gttccctcat tcgagtgctc cggcgcacag acccgcgccc
61 cgccgtccgc gagcctcccg agagccgtcc cttcgtccgg ccctggagca ttgcgtttgt
121 cgccggtgtc gcagtgcgag gatggcgccg cgggtgtagc ggctctctgc gcaggccgag
181 tgggcccaga gaagcgagga actccgcagc tcgtcgacac gtctcgtctc ctgtcccaat
241 tcagggcttg gtgaggtgac tcgcggtcgc gggtgactcg ccggcaggac actgcctgga
301 acgcctggag cgcctcccac tgcagacgtc tgtccgtctc cagccgctct cctctgacgg
361 gtcctgcctc agttggcgga atggcggcca cgggagccaa tgcagagaaa gctgaaagtc
421 acaatgattg ccccgtcaga cttttaaatc caaacatagc aaaaatgaaa gaagatattc
481 tctatcattt caatctcacc actagcagac acaatttccc agccttgttt ggagatgtga
541 agtttgtgtg tgttggtgga agcccctccc ggatgaaagc cttcatcagg tgcgttggtg
601 cagagctggg ccttgactgc ccaggtagag actatcccaa catctgtgcg ggaactgacc
661 gctatgccat gtataaagta ggaccggtgc tgtctgtcag tcatggtatg ggcattcctt
721 ctatctcaat catgttgcat gagctcataa agctgctgta ctatgcccgg tgctccaacg
781 tcactatcat ccgcattggc acttctggtg ggataggtct ggagcccggc actgtggtca
841 taacagagca ggcagtggat acctgcttca aggcagagtt tgagcagatt gtcctgggga
901 agcgggtcat ccggaaaacg gaccttaaca agaagctggt gcaggagctg ttgctgtgtt
961 ctgcagagct gagcgagttc accacagtgg tggggaacac catgtgcacc ttggacttct
1021 atgaagggca aggccgtctg gatggggctc tctgctccta cacggagaag gacaagcagg
1081 cgtatctgga ggcagcctat gcagccggcg tccgcaatat cgagatggag tcctcggtgt
1141 ttgccgccat gtgcagcgcc tgcggcctcc aagcggccgt ggtgtgtgtc accctcctga
1201 accgcctgga aggggaccag atcagcagcc ctcgcaatgt gctcagcgag taccagcaga
1261 ggccgcagcg gctggtgagc tacttcatca agaagaaact gagcaaggcc tgagcgctgc
1321 cctgcacctc cgcagacctg ctgtgatgac ttgccattaa aagcattgtc caaaaaaaaa
1381 aaaaaaaaaa aaaaaaaaa
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