LOCUS BC001320 1691 bp mRNA linear HUM 04-NOV-2003
DEFINITION Homo sapiens solute carrier family 39 (zinc transporter), member 8,
mRNA (cDNA clone IMAGE:3456026), partial cds.
ACCESSION BC001320
VERSION BC001320.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1691)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1691)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: l Column: 13.
FEATURES Location/Qualifiers
source 1..1691
/db_xref="H-InvDB:HIT000085986"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3456026"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1691
/gene="SLC39A8"
/gene_synonym="BIGM103"
/db_xref="GeneID:64116"
CDS <1..294
/gene="SLC39A8"
/gene_synonym="BIGM103"
/codon_start=1
/product="SLC39A8 protein"
/protein_id="AAH01320.1"
/db_xref="GeneID:64116"
/translation="QALLFNFLSACSCYVGLAFGILVGNNFAPNIIFALAGGMFLYIS
LADMFPEMNDMLREKVTGRKTDFTFFMIQNAGMLTGFTAILLITLYAGEIELE"
misc_feature 1..264
/gene="SLC39A8"
/gene_synonym="BIGM103"
/note="Zip; Region: ZIP Zinc transporter. The ZIP family
consists of zinc transport proteins and many putative
metal transporters. The main contribution to this family
is from the Arabidopsis thaliana ZIP protein family these
proteins are responsible for zinc uptake in the plant.
Also found within this family are C. elegans proteins of
unknown function which are annotated as being similar to
human growth arrest inducible gene product, although this
protein in not found within this family"
/db_xref="CDD:pfam02535"
BASE COUNT 574 a 267 c 307 g 543 t
ORIGIN
1 caagccttgc tattcaactt cctttctgca tgttcctgct atgttgggct agcttttggc
61 attttggtgg gcaacaattt cgctccaaat attatatttg cacttgctgg aggcatgttc
121 ctctatattt ctctggcaga tatgtttcca gagatgaatg atatgctgag agaaaaggta
181 actggaagaa aaaccgattt caccttcttc atgattcaga atgctggaat gttaactgga
241 ttcacagcca ttctactcat taccttgtat gcaggagaaa tcgaattgga gtaatagaaa
301 atggaagatg gtgttgttaa taaaggcatt taatagataa aaacatctcc aaaaaggatt
361 ttgaagctga tcctatttag ttaaaaagat aattttgctt tcaaccgtag gtccagaaaa
421 ctaattattg gcatcagtct gtgaaatagt ccattatttg ttgttaaaaa tgcttcaaaa
481 ggttttcagt gtcagtctga gatgcctggt atataggagc ctttgggaaa tacctatttt
541 tcagtattcc atgcatattg gatatcacca tgaagcaaga gacatgcatt ctataatcat
601 gtagacactc agactcaggg gaaaatacaa gttatatcct gaaagccttt aaaactctat
661 ggtaggatca aagattcaaa tggtttcaga gaggttttat ttcaattaat ttgttctagt
721 gctttcaaga gcaagtacat caaaatgtag aaggtaaaat gtatgcaaca ctaatataaa
781 ttattccaag tctttaagga gccaaagaaa aaaaagattt ctcacagctt tttgttctgt
841 tttgtatttc aattaggaac ttgcagtatt attttgaaaa ccattctaaa ataataggag
901 ttaggaaata aataaagttt tgctagccct gctaagttca ggcttagagg cttatcgcta
961 agtgtaaact tcaccagatt ccacaaaaag ctggatagct ttttttctga cttatgttgt
1021 ggttgcaccc ctcacaaatg gcagaacagt atgtaaagct ggtaacacct cggtttcagt
1081 gcaccatgtg tttgctttgt gaaggtgaag aatatgttgg tttagagaaa gaaattggat
1141 gtaattttat gcaatttact tttaaagaca aacataacta tttagcagag aatattttaa
1201 taaatgcaaa acaacagctg gactgctgta catcaaggac agattaactg gaaaacatat
1261 gttccttatg tgtgattgag agccattcag aaaagacttc ctttgtgttc agcctatact
1321 tttccatatg gtataccttg aaaaaaatta gcacaccatg gttatttttc taccttttat
1381 aaaagacaga gcctgtttac tcatttagaa gatagagaaa attggtctaa aattgaacat
1441 cctagattca cactcccaag tcacttaagg tgatttgatg gtgaggaaaa tgattgacaa
1501 agcccaacaa tgatctcagg aattacattt tccaacagac caaaaaatgt tttcatgtag
1561 cagcaatgca gatttggtga atatttaata tatattttag tatgtatttc actttatgac
1621 tgacaattaa aaaatattgt ttggccaaat agtaaacacc cttttgaaac catgaaaaaa
1681 aaaaaaaaaa a
//