LOCUS BC001310 902 bp mRNA linear HUM 14-SEP-2006
DEFINITION Homo sapiens chromosome 2 open reading frame 49, mRNA (cDNA clone
MGC:5509 IMAGE:3453623), complete cds.
ACCESSION BC001310
VERSION BC001310.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 902)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 902)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: d Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13129093.
FEATURES Location/Qualifiers
source 1..902
/db_xref="H-InvDB:HIT000030311"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5509 IMAGE:3453623"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..902
/gene="C2orf49"
/gene_synonym="MGC5509"
/db_xref="GeneID:79074"
/db_xref="HGNC:HGNC:28772"
CDS 33..731
/gene="C2orf49"
/gene_synonym="MGC5509"
/codon_start=1
/product="chromosome 2 open reading frame 49"
/protein_id="AAH01310.1"
/db_xref="GeneID:79074"
/db_xref="HGNC:HGNC:28772"
/translation="MAGDVGGRSCTDSELLLHPELLSQEFLLLTLEQKNIAVETDVRV
NKDSLTDLYVQHAIPLPQRDLPKNRWGKMMEKKREQHEIKNETKRSSTVDGLRKRPLI
VFDGSSTSTSIKVKKTENGDNDRLKPPPQASFTSNAFRKLSNSSSSVSPLILSSNLPV
NNKTEHNNNDAKQNHDLTHRKSPSGPVKSPPLSPVGTTPVKLKRAAPKEEAEAMNNLK
PPQAKRKIQHVTWP"
BASE COUNT 314 a 177 c 195 g 216 t
ORIGIN
1 gggtagccga ctggggtctc ctggcgacga ccatggcggg ggatgtgggc ggtcgcagct
61 gcacggactc ggaactgctg ctgcacccgg agctgctgtc ccaggagttc cttctcctca
121 ctctggagca gaagaacata gctgttgaaa ctgatgtaag agtaaacaaa gacagtctta
181 ctgaccttta tgtccaacat gcaataccat tgcctcagag ggatttgccg aagaatagat
241 gggggaaaat gatggaaaag aaaagagaac aacatgagat taaaaatgag actaaaagga
301 gtagcactgt agatgggtta aggaaaagac ccctcatcgt atttgatgga agttcaacaa
361 gtacaagcat aaaagtgaaa aagacagaga atggagataa tgatcgactg aagcctcccc
421 cgcaggcaag ctttaccagt aatgccttta gaaaattatc aaattcctct tcgagtgttt
481 cacccctaat tttgtcttcc aatttgcctg tgaacaataa aacggaacac aataataatg
541 acgctaaaca gaaccatgac ttaacgcata ggaaaagtcc ttcaggccct gtgaagtcgc
601 caccattgtc ccctgttgga actactccag tgaagttaaa gagagctgct cctaaagaag
661 aggcagaggc catgaataac ctgaagcccc cacaagcaaa aaggaagata caacatgtta
721 cttggccctg aagaaaagtt tccaaaaatg taaatatact gtaactgtag tttttcaaat
781 atgttcatat atattgacaa tatttacaga aatcctgatt attgtggaat tttcttaaga
841 ggtttcaaat aggtttaaaa aaataaagga tttattttcc ttcccttaaa aaaaaaaaaa
901 aa
//