LOCUS BC001309 2097 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transmembrane protein 109, mRNA (cDNA clone MGC:5508
IMAGE:3453616), complete cds.
ACCESSION BC001309
VERSION BC001309.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2097)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2097)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: c Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13129091.
FEATURES Location/Qualifiers
source 1..2097
/db_xref="H-InvDB:HIT000030310"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5508 IMAGE:3453616"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2097
/gene="TMEM109"
/gene_synonym="MGC5508"
/db_xref="GeneID:79073"
/db_xref="HGNC:HGNC:28771"
CDS 73..804
/gene="TMEM109"
/gene_synonym="MGC5508"
/codon_start=1
/product="transmembrane protein 109"
/protein_id="AAH01309.1"
/db_xref="GeneID:79073"
/db_xref="HGNC:HGNC:28771"
/translation="MAASSISSPWGKHVFKAILMVLVALILLHSALAQSRRDFAPPGQ
QKREAPVDVLTQIGRSVRGTLDAWIGPETMHLVSESSSQVLWAISSAISVAFFALSGI
AAQLLNALGLAGDYLAQGLKLSPGQVQTFLLWGAGALVVYWLLSLLLGLVLALLGRIL
WGLKLVIFLAGFVALMRSVPDPSTRALLLLALLILYALLSRLTGSRASGAQLEAKVRG
LERQVEELRWRQRRAAKGARSVEEE"
BASE COUNT 391 a 613 c 577 g 516 t
ORIGIN
1 ggcgcgggtt tggtggcgcg tttcagcgaa gtcgcacgtg aaggatagca gtggcctgag
61 aaagacccag tcatggcagc ctccagcatc agttcaccat ggggaaagca tgtgttcaaa
121 gccattctga tggtcctagt ggcccttatc ctcctccact cagcattggc ccagtcccgt
181 cgagactttg caccaccagg ccaacagaag agagaagccc cagttgatgt cttgacccag
241 ataggtcgat ctgtgcgagg gacactggat gcctggattg ggccagagac catgcacctg
301 gtgtcagagt cttcgtccca agtgttgtgg gccatctcat cagccatttc tgtggccttc
361 tttgctctgt ctgggatcgc cgcacagctg ctgaatgcct tgggactagc tggtgattac
421 ctcgcccagg gcctgaagct cagccctggc caggtccaga ccttcctgct gtggggagca
481 ggggccctgg tcgtctactg gctgctgtct ctgctcctcg gcttggtctt ggccttgctg
541 gggcggatcc tgtggggcct gaagcttgtc atcttcctgg ccggcttcgt ggccctgatg
601 aggtcggtgc ctgacccttc cacccgggcc ctgctactcc tggccttgct gatcctctac
661 gccctgctga gccggctcac tggctcccga gcctctgggg cccaactcga ggccaaggtg
721 cgagggctgg aacgccaggt ggaggagctg cgctggcgcc agaggcgagc ggccaagggg
781 gcccgcagtg tggaggagga gtgagccgga tgccccacac accgccagtg tcataccaaa
841 gagctgagct gcttcggggc catgcagccc tcctgccagc cccctgccct tttcttgccc
901 tgtctctgaa ccttcagaac attgatcctt gccgcagccc cactagccaa gagaaacaga
961 gaaagaccat tccccctgcc tgtccttgcg gccctgtctt ctgaggttct ctgtctgggg
1021 ttggctctct taaccctttc tctgctccca gcctgcctca ccagggaagg ttggaggggc
1081 ctccctctgg cttctgcatc tgcgccagca aacatcactg ccgttggtct ctcatgactt
1141 aactggcttc cctctgctgc tgccttggct tcctcctaat gctcgtgctc tcctgtcctt
1201 ctgaagttgc tccttggcca aatctccagc tcccttcttg ttttcctcat cctcctaccc
1261 tgtactccca ccaaaccatg gtcctttaag gcacgctcct gtcctcctca ttgcccagca
1321 gtagggaggg gcaggggtaa ggggacctga ggataaaggg tggggaaaca gggtcccctg
1381 aggcctgtgg gggctgcagg ggaggaggat gtaccttgtg tctctttcaa gtgccttaat
1441 ccgagccagc agggccttct gcttgcctgc tgccatactg tatgtaggaa agtgttctgt
1501 ggctgctttg tgtcaaaaga gcagtcactc tcagaatctt gattccccat cagccaaagc
1561 aaaagatggc tgctgctttg taggcatgtg cctgcaagtg ggaccttgct gggcattata
1621 tgccctgtgg gggtttcaga gaccctgaaa gaggagggag gacccgcctc cttgtctgca
1681 caactgcatg cacttctctc cccatcgctc cacaacctga aaccgagaag gagttgctga
1741 ccagtgccca ccccggcagc ccgggaggaa cacaggcagc tcctttccct tcacgtggtc
1801 tgcagagagc agggtgagct gccagctgcc cctctccacc agggtaccct gtcttggtgg
1861 ttaggggcca cttttccttt gaggctctag tggaggtgga tgtccttctc tgccaggctt
1921 ggcacatgat gtgaagaata aatgcccaat tcttactgtt caggtttgat gtggaatcac
1981 agctgcagtg atatatattt tttatcagtg cttggttggt tttaaataaa gtgcacgcta
2041 ttttattatc ttgttctgaa taaaatgtat ttactccaaa aaaaaaaaaa aaaaaaa
//