LOCUS BC001282 1924 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens high mobility group nucleosomal binding domain 4, mRNA
(cDNA clone MGC:5145 IMAGE:3452950), complete cds.
ACCESSION BC001282
VERSION BC001282.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1924)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1924)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: m Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23238232.
FEATURES Location/Qualifiers
source 1..1924
/db_xref="H-InvDB:HIT000030288"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5145 IMAGE:3452950"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1924
/gene="HMGN4"
/gene_synonym="MGC5145"
/gene_synonym="NHC"
/db_xref="GeneID:10473"
/db_xref="HGNC:HGNC:4989"
CDS 183..455
/gene="HMGN4"
/gene_synonym="MGC5145"
/gene_synonym="NHC"
/codon_start=1
/product="high mobility group nucleosomal binding domain
4"
/protein_id="AAH01282.1"
/db_xref="GeneID:10473"
/db_xref="HGNC:HGNC:4989"
/translation="MPKRKAKGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPRPKKA
SAKKGEKLPKGRKGKADAGKDGNNPAKNRDASTLQSQKAEGTGDAK"
BASE COUNT 551 a 391 c 392 g 590 t
ORIGIN
1 tctgtcttag ggctggtgct ggccctgccc acgcctaggg ctccggcgcg tcacgggcct
61 cagctgggat tcccgcgccc ctcggacggc cacgagactc ggacatcttt ccaggaacag
121 cgtgaggagg acagaagcac ccaacaggac tgctcaagcc acctgcgaac actgctgcta
181 ccatgcccaa gagaaaggca aaaggagatg ctaaaggtga taaagcaaag gtgaaggatg
241 agccacagag gagatcagct cggttgtctg ctaaaccagc tcctccaaaa ccagagccca
301 ggcctaaaaa ggcctctgca aagaagggag agaagcttcc caaagggaga aaggggaaag
361 cagatgctgg aaaggatgga aacaaccctg caaaaaaccg agatgcctct acactccagt
421 cccagaaagc ggaaggcact ggggatgcca agtgaaatgt acatttttga gagctctgta
481 cttatagtga ctctactgtt tgaaatacta tttttttaaa tcaagtttta taaaagtgta
541 gaattttggc ttttttaagt tatgttgtta gcacacagga cacttccttg ttgtcttttg
601 tggaaagggc aagtaccact aatagggtgt atctcagaaa ctgaattgaa ataagggaaa
661 ataggatttt ctgtcctggt ttttgaagat tgttcttgat tcccttgatt cccaggagag
721 attctctgac attcacgtgt cagccacttt ggcacggaag ccttacagtg tggggaacca
781 aaacttcgtg tctcctcttt ccccgatgcc atcagcatag acttgacttc cttaaaccga
841 gagttttgat gtggccttgg caaccctaaa atcagctgtg ttaggtaaca aaactcaggc
901 tttctgttga tgacatcgag atggtgtcac ttaaaagagc caagattcct gttttcagtt
961 tgtggattca tcctgctggt tttactttag tccctccatg tcaaagtggg cctgagaaaa
1021 gctcatacat gcctcatgtg aagtgtccac cctctctgaa aatctttctt gttcaaaaca
1081 gcaacgacat atcttgttaa cttttacggt gacttttgga ggaggggagt ttggaaattg
1141 taaaatgtta tagattgttg cctatttcct gctgaaagta aatgttttta aaaagtatca
1201 tataaagctg aatacaaatt ggtttggggg gagatccttt cctacccaaa gtcataaata
1261 tattctttac tgccttgtgg aaattttata gttttgcctt tcacatttgt ctttagtctg
1321 tcctgaactg atttttgtga aaattatgag ttagaaattc aacttaacat ttttcatatt
1381 cgaagtggtt gtctctgcac tatttactga aaagttcatc ctttccccag tgatttgtaa
1441 cactgcctct ttcataaatt aaatttttgt gtatgtgtgt gggtcttttg atggtttcta
1501 ttctgactga catcaatttg tctaatcttg tagcagtaca gtacagtcct gattactgca
1561 actttaggaa aaggtctgat aaaaaccaag atgcctccac attttgtcat aattgtaacc
1621 aatttcacct ctgtctccag tatcaccaca aaattgttct tccttggagt gtcttggcta
1681 ttcttagcca actgttcctc catattactt ctagaattag accaacaatt tataaatcaa
1741 acaaacccaa gagcattgaa attttgattg gatttgtatt gaatttatag attaatctgg
1801 taaaccatgt catctttaca atgttgtctt ccaatacatg aatatggtac agctcttcat
1861 ttacttaggc ctttgaaata tctttcaata aagtttataa ttttctccaa aaaaaaaaaa
1921 aaaa
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