LOCUS BC001262 2272 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens tRNA methyltransferase 6 homolog (S. cerevisiae), mRNA
(cDNA clone MGC:5029 IMAGE:3458167), complete cds.
ACCESSION BC001262
VERSION BC001262.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2272)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2272)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: g Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29244922.
FEATURES Location/Qualifiers
source 1..2272
/db_xref="H-InvDB:HIT000030269"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5029 IMAGE:3458167"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2272
/gene="TRMT6"
/gene_synonym="CGI-09"
/gene_synonym="GCD10"
/gene_synonym="Gcd10p"
/db_xref="GeneID:51605"
/db_xref="HGNC:HGNC:20900"
CDS 73..1566
/gene="TRMT6"
/gene_synonym="CGI-09"
/gene_synonym="GCD10"
/gene_synonym="Gcd10p"
/codon_start=1
/product="tRNA methyltransferase 6 homolog (S.
cerevisiae)"
/protein_id="AAH01262.1"
/db_xref="GeneID:51605"
/db_xref="HGNC:HGNC:20900"
/translation="MEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKAVQVQRRKK
VTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRNIVDDGK
SQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEAIITV
VKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGAMM
ERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPK
ERGSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGLIVASRFHPTPLLLSLLDFVA
PSRPFVVYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKLLMSGGG
GYLLSGFTVAMDNLKADTSLKSNASTLESHETEEPAAKKRKCPESDS"
BASE COUNT 727 a 435 c 527 g 583 t
ORIGIN
1 gtgaggctgg cggtggcgac aaccgaggag gaggggcggg acgccgtgga gcacggcgac
61 cggctgagcg tcatggaggg ctcaggggag cagccgggcc cacaaccaca gcatcccgga
121 gaccaccgca tccgcgacgg cgacttcgtg gtgctgaaac gtgaagatgt gtttaaagca
181 gtacaagtcc agcggagaaa aaaagtaact ttcgaaaaac agtggttcta cctggataac
241 gtcattggcc atagttatgg aactgcattt gaagtgacca gtggaggaag tctacagccc
301 aagaagaaga gggaagagcc tactgcagag actaaagaag cgggcactga taatcgaaat
361 atagttgatg atgggaaatc tcagaaactt actcaagatg acataaaagc tttgaaggac
421 aagggcatta aaggagagga aatagttcag cagttaattg aaaatagtac aacattccga
481 gacaagacag aatttgccca agataaatat attaaaaaga agaaaaaaaa atatgaagcc
541 atcattactg ttgtgaagcc atccacccgt attctttcaa ttatgtatta tgcaagagaa
601 cctggaaaaa ttaaccacat gagatacgat acactagccc agatgttgac gttgggaaat
661 atccgtgctg gcaacaaaat gattgtgatg gaaacgtgtg caggcttggt gctgggtgca
721 atgatggaac gaatgggagg ttttggctcc attattcagc tataccctgg aggaggacct
781 gttcgggcag caacagcatg ttttggattt cccaaatctt ttctcagtgg tctttatgaa
841 ttccctctca acaaagtgga cagtcttcta catggaacat tttctgccaa gatgttatct
901 tcagagccaa aagacagtgc tttggttgaa gaaagtaatg gcacactgga ggaaaaacag
961 gcttctgaac aagagaatga agacagcatg gcagaggccc cagagagcaa ccacccagaa
1021 gaccaggaaa caatggaaac aatttctcaa gatccagaac ataaggggcc taaagagaga
1081 ggaagcaaaa aagattatat tcaggaaaaa cagaggagac aagaagagca gaggaaaaga
1141 catttagagg ctgccgctct gctgagtgaa agaaacgcag atggtttaat tgtagctagt
1201 cgtttccacc ccactcccct gctgctgtct ttgctggact ttgtggcccc ttcaaggccg
1261 tttgtggtct actgtcagta caaagagcct ctgttggaat gctacacaaa actgcgggag
1321 aggggagggg tcatcaacct caggctgtct gaaacctggc tcagaaatta tcaggttttg
1381 ccagatcgaa gtcatcctaa actgctgatg agtggaggtg ggggttatct tctctccggc
1441 ttcaccgttg ccatggacaa ccttaaagca gacaccagcc tcaaatctaa tgcaagcact
1501 ttagaatcac acgagactga ggagcctgca gctaaaaaac gaaaatgccc agagtctgac
1561 tcttaaccct tttgagaatt gctctgaatt ttgttctcag gcattataca gttagtaatt
1621 aaactttaaa tgccattact acttgttttt tcatatccca agaataagaa catgtctatg
1681 tacccgtttc taggaaggag gagtatatgc cttttgtcta tttctgacac agatgcattt
1741 ggtctgtcaa aactgcaacc atggggtatg tagtatgacc aactgcattt aacaaaactc
1801 ctctaagtac ttctaaatat tctgtgcaaa tatcttgaga acttcaacat cctaaaaatg
1861 tgtttctaca agactttata ttttaagcta agtggaataa tacaacgtaa ctaaaacatg
1921 gcgggtaccg aaaggagggc aattcatgga agaaatttcc tctgttcatt ccgttctctt
1981 caacctaagc aatatggatg tgtgagtgtg tgatttatta tggtaccaaa aatgtccacc
2041 ttctttcctg cagcggaata agcttttttg aaatgctgag gttttatttt aatagttgac
2101 aacctgggaa agttctgagt atttatttta ctgctctttt ttgtgcatag aaaggtttag
2161 tagggtactt ttttgcatta atttgccaat actcttattc tttgttctaa ataaagtgac
2221 tagaattttt gtgtactatt caattaaagg aaaaaaaaaa aaaaaaaaaa aa
//