LOCUS BC001261 1648 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens family with sequence similarity 50, member B, mRNA
(cDNA clone MGC:5026 IMAGE:3457886), complete cds.
ACCESSION BC001261
VERSION BC001261.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1648)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1648)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: k Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6912325.
FEATURES Location/Qualifiers
source 1..1648
/db_xref="H-InvDB:HIT000030268"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5026 IMAGE:3457886"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1648
/gene="FAM50B"
/gene_synonym="D6S2654E"
/gene_synonym="X5L"
/db_xref="GeneID:26240"
/db_xref="HGNC:HGNC:18789"
CDS 123..1100
/gene="FAM50B"
/gene_synonym="D6S2654E"
/gene_synonym="X5L"
/codon_start=1
/product="family with sequence similarity 50, member B"
/protein_id="AAH01261.1"
/db_xref="GeneID:26240"
/db_xref="HGNC:HGNC:18789"
/translation="MAQYKGTMREAGRAMHLLKKRERQREQMEVLKQRIAEETILKSQ
VDKRFSAHYDAVEAELKSSTVGLVTLNDMKARQEALVRERERQLAKRQHLEEQRLQQE
RQREQEQRRERKRKISCLSFALDDLDDQADAAEARRAGNLGKNPDVDTSFLPDRDREE
EENRLREELRQEWEAQREKVKDEEMEVTFSYWDGSGHRRTVRVRKGNTVQQFLKKALQ
GLRKDFLELRSAGVEQLMFIKEDLILPHYHTFYDFIIARARGKSGPLFSFDVHDDVRL
LSDATMEKDESHAGKVVLRSWYEKNKHIFPASRWEAYDPEKKWDKYTIR"
BASE COUNT 377 a 435 c 522 g 314 t
ORIGIN
1 ggctgtcgcg agagcccggg gcgagtgggc ctctgctcgt gggtggttct cgtggaggtc
61 agctcccgcg tgtctccgct cgacagggtg cttgggcaga gcccatcggg taggcgcggg
121 ccatggcgca gtacaagggc accatgcgcg aggcaggccg tgccatgcac ctcctcaaga
181 agcgcgaaag gcagcgggag cagatggagg tgctgaagca gcgcatcgcc gaggagacca
241 tcctcaagtc gcaggtggac aagaggttct cggcgcatta cgacgccgtg gaggccgagc
301 tgaagtccag cacggtgggc ctggtgaccc tgaacgacat gaaggcccgg caggaggccc
361 tggtcaggga gcgcgagcgg cagctggcca agcgccagca cctggaggag cagcggctgc
421 agcaggagcg gcagcgggag caggagcagc ggcgcgagcg caagcgtaag atctcctgcc
481 tgtcctttgc actagacgac ctcgatgacc aggccgacgc ggccgaggcc aggcgcgccg
541 gaaacctggg caagaacccc gacgtggaca ccagcttcct gccagaccgc gaccgcgagg
601 aggaggagaa ccggctccga gaggagctgc gccaagagtg ggaggcgcag cgcgagaaag
661 tgaaggacga ggagatggag gtcaccttca gctactggga cggctcgggc caccggcgca
721 cggtgcgggt gcgcaagggc aacacggtgc agcagttcct gaagaaggcg ctgcaggggc
781 tgcgcaagga cttcctggag ctgcgctccg ccggcgtgga gcagctcatg ttcatcaagg
841 aggacctcat cctgccgcac taccacacct tctacgactt catcatcgcc agggcgaggg
901 gcaagagcgg gccgctcttc agcttcgatg tgcacgatga cgtgcgcctg ctcagcgacg
961 ccaccatgga gaaggacgag tcgcacgcgg gcaaggtggt gctgcgcagc tggtacgaga
1021 agaacaagca catcttcccc gccagccgct gggaggccta tgaccccgag aagaagtggg
1081 acaagtacac catccgctaa cacccgcctg ccagagcgga aaccgggggt ggggggagac
1141 actcatttct aggccccatc accagtcact tgatttcgtg accttgattt cttcccccaa
1201 atttaataaa gacagagggt tctcatgatt cacattggtt gtgctattgc tgatgttatg
1261 ctttggttgc ttggttggtc ttttctgagt attttagtgt tgccacctgg atttgctgca
1321 ttgctctgct gagctgtatt gaaaccatga ctgggcccac tgtcagacag aaattagaat
1381 aggaggcaca ttttttacct ggtggttatg agcatggact tgggggccac agtgactgag
1441 tttgattccc gacacagcct cctccttgct gtgtagtttt gggtaagctt attaaacccc
1501 catgcctcag tttggtcacc tgtaaaagga aataacaaga gcacttactt tataagattg
1561 atgtgagtat taagtgaatt aatatttgta aaacgcttag ctcttaataa atgtttctgt
1621 tcttataaaa aaaaaaaaaa aaaaaaaa
//