LOCUS BC001247 2164 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens LIM domain and actin binding 1, mRNA (cDNA clone
IMAGE:3452714), partial cds.
ACCESSION BC001247
VERSION BC001247.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2164)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2164)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: o Column: 9.
FEATURES Location/Qualifiers
source 1..2164
/db_xref="H-InvDB:HIT000030255"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3452714"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2164
/gene="LIMA1"
/gene_synonym="EPLIN"
/gene_synonym="SREBP3"
/db_xref="GeneID:51474"
/db_xref="HGNC:HGNC:24636"
/db_xref="MIM:608364"
CDS <1..1983
/gene="LIMA1"
/gene_synonym="EPLIN"
/gene_synonym="SREBP3"
/codon_start=1
/product="LIMA1 protein"
/protein_id="AAH01247.2"
/db_xref="GeneID:51474"
/db_xref="HGNC:HGNC:24636"
/db_xref="MIM:608364"
/translation="HRADHPPAEVTSHAASGAKADQEEQIHPRSRLRSPPEALVQGRY
PHIKDGEDLKDHSTESKKMENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMM
FEKGEPTQTKILRAQSRSASGRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLE
LPRLSETSIKDRMAKYQAAVSKQSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVC
ITHQEGEKISANENSLAVRSTPAEDDSRDSQVKSEVQQPVHPKPLSPDSRASSLSESS
PPKAMKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLH
GRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPAQLANARETPHSP
GVEDAPIAKVGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTELGSSGSALEEGI
KMSKPKWPPEDEISKPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQSTSVKSPKT
VSPPIRKGWSMSEQSEESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESKGETGKR
SKEGHSLEMENENLVENGADSDEDDNSFLKQQSPQEPKSLNWSSFVDNTFAEEFTTQN
QKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE"
BASE COUNT 744 a 472 c 513 g 435 t
ORIGIN
1 cacagagcag accatcctcc tgctgaagtg acaagccacg ctgcttctgg agccaaagct
61 gaccaagaag aacaaatcca ccccagatct agactcaggt cacctcctga agccctcgtt
121 cagggtcgat atccccacat caaggacggt gaggatctta aagaccactc aacagaaagt
181 aaaaaaatgg aaaattgtct aggagaatcc aggcatgaag tagaaaaatc agaaatcagt
241 gaaaacacag atgcttcggg caaaatagag aaatataatg ttccgctgaa caggcttaag
301 atgatgtttg agaaaggtga accaactcaa actaagattc tccgggccca aagccgaagt
361 gcaagtggaa ggaagatctc tgaaaacagc tattctctag atgacctgga aataggccca
421 ggtcagttgt catcttctac atttgactcg gagaaaaatg agagtagacg aaatctggaa
481 cttccacgcc tctcagaaac ctctataaag gatcgaatgg ccaagtacca ggcagctgtg
541 tccaaacaaa gcagctcaac caactataca aatgagctga aagccagtgg tggcgaaatc
601 aaaattcata aaatggagca aaaggagaat gtgcccccag gtcctgaggt ctgcatcacc
661 catcaggaag gggaaaagat ttctgcaaat gagaatagcc tggcagtccg ttccacccct
721 gccgaagatg actcccgtga ctcccaggtt aagagtgagg ttcaacagcc tgtccatccc
781 aagccactaa gtccagattc cagagcctcc agtctttctg aaagttctcc tcccaaagca
841 atgaagtttc aggcacctgc aagagagacc tgcgtggaat gtcagaagac agtctatcca
901 atggagcgtc tcttggccaa ccagcaggtg tttcacatca gctgcttccg ttgctcctat
961 tgcaacaaca aactcagtct aggaacatat gcatctttac atggaagaat ctattgtaag
1021 cctcacttca atcaactctt taaatctaag ggcaactatg atgaaggctt tgggcacaga
1081 ccacacaagg atctatgggc aagcaaaaat gaaaacgaag agattttgga gagaccagcc
1141 cagcttgcaa atgcaaggga gacccctcac agcccagggg tagaagatgc ccctattgct
1201 aaggtgggtg tcctggctgc aagtatggaa gccaaggcct cctctcagca ggagaaggaa
1261 gacaagccag ctgaaaccaa gaagctgagg atcgcctggc caccccccac tgaacttgga
1321 agttcaggaa gtgccttgga ggaagggatc aaaatgtcaa agcccaaatg gcctcctgaa
1381 gacgaaatca gcaagcccga agttcctgag gatgtcgatc tagatctgaa gaagctaaga
1441 cgatcttctt cactgaagga aagaagccgc ccattcactg tagcagcttc atttcaaagc
1501 acctctgtca agagcccaaa aactgtgtcc ccacctatca ggaaaggctg gagcatgtca
1561 gagcagagtg aagagtctgt gggtggaaga gttgcagaaa ggaaacaagt ggaaaatgcc
1621 aaggcttcta agaagaatgg gaatgtggga aaaacaacct ggcaaaacaa agaatctaaa
1681 ggagagacag ggaagagaag taaggaaggt catagtttgg agatggagaa tgagaatctt
1741 gtagaaaatg gtgcagactc cgatgaagat gataacagct tcctcaaaca acaatctcca
1801 caagaaccca agtctctgaa ttggtcgagt tttgtagaca acacctttgc tgaagaattc
1861 actactcaga atcagaaatc ccaggatgtg gaactctggg agggagaagt ggtcaaagag
1921 ctctctgtgg aagaacagat aaagagaaat cggtattatg atgaggatga ggatgaagag
1981 tgacaaattg caatgatgct gggccttaaa ttcatgttag tgttagcgag ccactgccct
2041 ttgtcaaaat gtgatgcaca taagcaggta tcccagcatg aaatgtaatt tacttggaag
2101 taactttgga aaagaattcc ttcttaaaat caaaaacaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaa
//