LOCUS BC001166 1385 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens galactokinase 1, mRNA (cDNA clone MGC:1746
IMAGE:3501788), complete cds.
ACCESSION BC001166
VERSION BC001166.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1385)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1385)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: i Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4503894.
FEATURES Location/Qualifiers
source 1..1385
/db_xref="H-InvDB:HIT000030189"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1746 IMAGE:3501788"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1385
/gene="GALK1"
/gene_synonym="GK1"
/db_xref="GeneID:2584"
/db_xref="HGNC:HGNC:4118"
/db_xref="MIM:604313"
CDS 45..1223
/gene="GALK1"
/gene_synonym="GK1"
/codon_start=1
/product="galactokinase 1"
/protein_id="AAH01166.1"
/db_xref="GeneID:2584"
/db_xref="HGNC:HGNC:4118"
/db_xref="MIM:604313"
/translation="MAALRQPQVAELLAEARRAFREEFGAEPELAVSAPGRVNLIGEH
TDYNQGLVLPMALELMTVLVGSPRKDGLVSLLTTSEGADEPQRLQFPLPTAQRSLEPG
TPRWANYVKGVIQYYPAAPLPGFSAVVVSSVPLGGGLSSSASLEVATYTFLQQLCPDS
GTIAARAQVCQQAEHSFAGMPCGIMDQFISLMGQKGHALLIDCRSLETSLVPLSDPKL
AVLITNSNVRHSLASSEYPVRRRQCEEVARALGKESLREVQLEELEAARDLVSKEGFR
RARHVVGEIRRTAQAAAALRRGDYRAFGRLMVESHRSLRDDYEVSCPELDQLVEAALA
VPGVYGSRMTGGGFGGCTVTLLEASAAPHAMRHIQEHYGGTATFYLSQAADGAKVLCL
"
BASE COUNT 277 a 431 c 443 g 234 t
ORIGIN
1 cggggctgtg ccggagcagc tgtgcagagc tgcaggcgcg cgtcatggct gctttgagac
61 agccccaggt cgcggagctg ctggccgagg cccggcgagc cttccgggag gagttcgggg
121 ccgagcccga gctggccgtg tcagcgccgg gccgcgtcaa cctcatcggg gaacacacgg
181 actacaacca gggcctggtg ctgcctatgg ctctggagct catgacggtg ctagtgggca
241 gcccccgcaa ggatgggctg gtgtctctcc tcaccacctc tgagggtgcc gatgagcccc
301 agcggctgca gtttccactg cccacagccc agcgctcgct ggagcctggg actcctcggt
361 gggccaacta tgtcaaggga gtgattcagt actacccagc tgcccccctc cctggcttca
421 gtgcagtggt ggtcagctca gtgcccctgg ggggtggcct gtccagctca gcatccttgg
481 aagtggccac gtacaccttc ctccagcagc tctgtccaga ctcgggcaca atagctgccc
541 gcgcccaggt gtgtcagcag gccgagcaca gcttcgcagg gatgccctgt ggcatcatgg
601 accagttcat ctcacttatg ggacagaaag gccacgcgct gctcattgac tgcaggtcct
661 tggagaccag cctggtgcca ctctcggacc ccaagctggc cgtgctcatc accaactcta
721 atgtccgcca ctccctggcc tccagcgagt accctgtgcg gcggcgccaa tgtgaagaag
781 tggcccgggc gctgggcaag gaaagcctcc gggaggtaca actggaagag ctagaggctg
841 ccagggacct ggtgagcaaa gagggcttcc ggcgggcccg gcacgtggtg ggggagattc
901 ggcgcacggc ccaggcagcg gccgccctga gacgtggcga ctacagagcc tttggccgcc
961 tcatggtgga gagccaccgc tcactcagag acgactatga ggtgagctgc ccagagctgg
1021 accagctggt ggaggctgcg cttgctgtgc ctggggttta tggcagccgc atgacgggcg
1081 gtggcttcgg tggctgcacg gtgacactgc tggaggcctc cgctgctccc cacgccatgc
1141 ggcacatcca ggagcactac ggcgggactg ccaccttcta cctctctcaa gcagccgatg
1201 gagccaaggt gctgtgcttg tgaggcaccc ccaggacagc acacggtgag ggtgcggggc
1261 ctgcaggcca gtcccacggc tctgtgcccg gtgccatctt ccatatccgg gtgctcaata
1321 aacttgtgcc tccaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1381 aaaaa
//