LOCUS BC001117 989 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens adaptor-related protein complex 1, sigma 2 subunit,
mRNA (cDNA clone MGC:1902 IMAGE:3050001), complete cds.
ACCESSION BC001117
VERSION BC001117.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 989)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 989)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001117.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: f Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22027654.
FEATURES Location/Qualifiers
source 1..989
/db_xref="H-InvDB:HIT000030148"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1902 IMAGE:3050001"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..989
/gene="AP1S2"
/gene_synonym="DC22"
/gene_synonym="MGC:1902"
/gene_synonym="SIGMA1B"
/db_xref="GeneID:8905"
/db_xref="HGNC:HGNC:560"
/db_xref="MIM:603532"
CDS 75..548
/gene="AP1S2"
/gene_synonym="DC22"
/gene_synonym="MGC:1902"
/gene_synonym="SIGMA1B"
/codon_start=1
/product="adaptor-related protein complex 1, sigma 2
subunit"
/protein_id="AAH01117.1"
/db_xref="GeneID:8905"
/db_xref="HGNC:HGNC:560"
/db_xref="MIM:603532"
/translation="MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPK
MCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDI
IFNFEKAYFILDEFLLGGEVQETSKKNVLKAIEQADLLQEEAETPRSVLEEIGLT"
BASE COUNT 300 a 183 c 208 g 298 t
ORIGIN
1 gcgacagggg cttccccttc gccgccgccg ccgccgccgg ccaagctccg ccgcgcccgc
61 ggcccgcggc cgccatgcag tttatgttgc tttttagtcg tcagggaaag cttcgactgc
121 aaaaatggta tgtcccacta tcagacaaag agaagaaaaa gatcacaaga gaacttgttc
181 agaccgtttt agcacggaaa cctaaaatgt gcagcttcct tgagtggcga gatctgaaga
241 ttgtttacaa aagatatgct agtctgtatt tttgctgtgc tattgaggat caggacaatg
301 aactaattac cctggaaata attcatcgtt atgtggaatt acttgacaag tatttcggca
361 gtgtctgtga actagatatc atctttaatt ttgagaaggc ttattttatt ttggatgagt
421 ttcttttggg aggggaagtt caggaaacat ccaagaaaaa tgtccttaaa gcaattgagc
481 aggctgatct actgcaggag gaagctgaaa ccccacgtag tgttcttgaa gaaattggac
541 tgacataact ctcctccctt gttgatgact tcttgtggca tttcacacac tgtagatggt
601 cactcccttc atgtccatgt tagctcatgg tgtaagatga tgtcttgtca gtattactgt
661 tttgctaagc cgcttcattc atgcctacac aatttttttt taaaagggaa ctttagttaa
721 ttaagtgata agggacttaa atatgaatta gaatggtgca gaaagagata ccttttctgg
781 atattttaaa gtttaaaggt cagtttctct taatctgatt atgtgcacat atgaaaatgg
841 cacatcatat acatgtaaaa tcaggcagta tacatttatt aattactgta tttgacaaag
901 gaaactctta aattataatg tgaaacctgg ttttatgaaa ccaaagacta gtgcagcatt
961 tcagcatatg taaaaaaaaa aaaaaaaaa
//