LOCUS BC001098 2365 bp mRNA linear HUM 22-SEP-2005
DEFINITION Homo sapiens ATG9 autophagy related 9 homolog A (S. cerevisiae),
mRNA (cDNA clone IMAGE:3508043), partial cds.
ACCESSION BC001098
VERSION BC001098.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2365)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2365)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC001098.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: m Column: 24.
FEATURES Location/Qualifiers
source 1..2365
/db_xref="H-InvDB:HIT000085959"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3508043"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2365
/gene="ATG9A"
/gene_synonym="MGD3208"
/db_xref="GeneID:79065"
CDS <1..1230
/gene="ATG9A"
/gene_synonym="MGD3208"
/codon_start=1
/product="ATG9A protein"
/protein_id="AAH01098.2"
/db_xref="GeneID:79065"
/translation="VFCPEQLLRVILAHIHYMPDHWQGNAHRSQTRDEFAQLFQYKAV
FILEELLSPIVTPLILIFCLRPRALEIIDFFRNFTVEVVGVGDTCSFAQMDVRQHGHP
QWLSAGQTEASVYQQAEDGKTELSLMHFAITNPGWQPPRESTAFLGFLKEQVQRDGAA
ASLAQGGLLPENALFTSIQSLQSESEPLSLIANVVAGSSCRGPPLPRDLQGSRHRAEV
ASALRSFSPLQPGQAPTGRAHSTMTGSGVDARTASSGSSVWEGQLQSLVLSEYASTEM
SLHALYMHQLHKQQAQAEPERHVWHRRESDESGESAPDEGGEGARAPQSIPRSASYPC
AAPRPGAPETTALHGGFQRRYGGITDPGTVPRVPSHFSRLPLGGWAEDGQSASRHPEP
VPEEGSEDELPPQVHKV"
BASE COUNT 499 a 726 c 661 g 479 t
ORIGIN
1 gtgttctgcc ctgagcagct gctccgcgtg atcctcgctc acatccacta catgcctgac
61 cactggcagg gtaatgccca ccgctcgcag acccgggacg agtttgccca gctcttccag
121 tacaaggcag tgttcatttt ggaagagttg ctgagcccca ttgtcacacc cctcatcctc
181 atcttctgcc tgcgcccacg ggccctggag attatagact tcttccgaaa cttcaccgtg
241 gaggtcgttg gtgtgggaga tacctgctcc tttgctcaga tggatgttcg ccagcatggt
301 catccccagt ggctatctgc tgggcagaca gaggcctcag tgtaccagca agctgaggat
361 ggaaagacag agttgtcact catgcacttt gccatcacca accctggctg gcagccacca
421 cgtgagagca cagccttcct aggcttcctc aaggagcagg ttcagcggga tggagcagct
481 gctagcctcg cccaaggggg tctgctccct gaaaatgccc tctttacgtc tatccagtcc
541 ttacaatctg agtctgagcc cctgagcctt atcgcaaatg tggtagctgg ctcatcctgc
601 cggggccctc cactgcccag agacctgcag ggctccaggc acagggctga agtcgcctct
661 gccctgcgct ccttctcccc gctgcaaccc gggcaggcgc ccacaggccg ggctcacagc
721 accatgacag gctctggggt ggatgccagg acagccagct ccgggagcag cgtgtgggaa
781 ggacagctgc agagcctggt gctgtcagaa tatgcatcca cagagatgag cctgcatgcc
841 ctctatatgc accagctcca caagcagcag gcccaggctg aacctgagcg gcatgtatgg
901 caccgccggg agagtgatga gagtggagaa agcgcccctg atgaaggggg agagggcgcc
961 cgggcccccc agtctatccc tcgctctgct agctatccct gtgcagcacc ccggcctgga
1021 gctcctgaga ccaccgccct gcatgggggc ttccagaggc gctacggtgg catcacagat
1081 cctggcacag tgcccagggt tccctctcat ttctctcggc tgcctcttgg agggtgggca
1141 gaagatgggc agtcggcatc aaggcaccct gagcccgtgc ccgaagaggg ctcggaggat
1201 gagctacccc ctcaggtgca caaggtatag acaaggctga gcagggttcc tgtggcccag
1261 gatggaggcc accgctgccc tgccatcccg tctgcctgcc atgggacggc tcctctgagt
1321 gttccctggc cccacgtgtg tggtgtttgt gtgtctgtgc ctggccaagg gaggtgccaa
1381 cactgggctt gccacagccc caggagagga atttggggcc taggaaccga gggcacacgg
1441 gactctagcc tcatccccag gacccccttg gctcagagtg tggtgctaga aactggtccc
1501 cagcccagcc ccagtactgc cacctttaca cctacccctg caagtcccca gagggctgcc
1561 cacgatagaa gctgccaagc agggagaacc tgtgccaact gtggagtggg gaggttgggc
1621 ctggaccctc aacccctgca accttcccta gccccctcaa tagatgagca ggtcaggctg
1681 tggcccttac ctcacccgca gttctcgccc agtgctgcag ccggctcacc tctctccgct
1741 tcttgcacat cactggcctg tgtgtgctgc ttgctcctgt tctgttcgct tgctcccgtt
1801 ccgttcggct tttgctttgc gttagggtga agaccctagc gtccagctcc cctcaacgct
1861 atattttgac actaaaaaag aaggtttcta aattgtagga gcaggatgga aatactttgc
1921 tgcccttgcc atcttttagg atgggccccc aggagactga ggtcttcctg ggccctcatt
1981 gctgcttatc gtacccccca tcacctgcac atgggacaga ccgggctgga gggtgacctt
2041 ggctgtgtac gtcccagcaa aagagctctg gcccgcatct cgctgtgccc tgaaggggga
2101 tgaagggcga tgcctcgccc gaggctttgg gctgctgcac tgcatgctgg gactgctcct
2161 actctctgtc ccacccctca cccagctgtg gtccggcttt gggagagtgg tgaattgcgc
2221 tgcccgaact cggagcggag cagggtaggg accgtgtaca gcttgataac ccttaataaa
2281 aagggagttt gaccagaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2341 aaaaaaaaaa aaaaaaaaaa aaaaa
//