LOCUS BC001060 2698 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens paired box 8, mRNA (cDNA clone MGC:2141
IMAGE:2963877), complete cds.
ACCESSION BC001060
VERSION BC001060.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2698)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2698)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC001060.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: b Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37577112.
FEATURES Location/Qualifiers
source 1..2698
/db_xref="H-InvDB:HIT000030110"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2141 IMAGE:2963877"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2698
/gene="PAX8"
/db_xref="GeneID:7849"
/db_xref="HGNC:HGNC:8622"
/db_xref="MIM:167415"
CDS 158..1510
/gene="PAX8"
/codon_start=1
/product="paired box 8"
/protein_id="AAH01060.1"
/db_xref="GeneID:7849"
/db_xref="HGNC:HGNC:8622"
/db_xref="MIM:167415"
/translation="MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRP
CDISRQLRVSHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTM
FAWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLI
PSSAVTPPESPQSDSLGSTYSINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSG
PRKHLRTDAFSQHHLEPLECPFERQHYPEAYASPSHTKGEQGLYPLPLLNSTLDDGKA
TLTPSNTPLGRNLSTHQTYPVVADPHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQ
VGSGVPPFNAFPHAASVYGQFTGQALLSGREMVGPTLPGYPPHIPTSGQGSYASSAIA
GMVAGSEYSGNAYGHTPYSSYSEAWRFPNSSLLSSPYYYSSTSRPSAPPTTATAFDHL
"
BASE COUNT 606 a 901 c 691 g 500 t
ORIGIN
1 cttcagaagg aggagagaca ccgggcccag ggcaccctcg cgggcggacc caagcagtga
61 gggcctgcag ccggccggcc agggcagcgg caggcgcggc ccggacctac gggaggaagc
121 cccgagccct cggcgggctg cgagcgactc cccggcgatg cctcacaact ccatcagatc
181 tggccatgga gggctgaacc agctgggagg ggcctttgtg aatggcagac ctctgccgga
241 agtggtccgc cagcgcatcg tagacctggc ccaccagggt gtaaggccct gcgacatctc
301 tcgccagctc cgcgtcagcc atggctgcgt cagcaagatc cttggcaggt actacgagac
361 tggcagcatc cggcctggag tgataggggg ctccaagccc aaggtggcca cccccaaggt
421 ggtggagaag attggggact acaaacgcca gaaccctacc atgtttgcct gggagatccg
481 agaccggctc ctggctgagg gcgtctgtga caatgacact gtgcccagtg tcagctccat
541 taatagaatc atccggacca aagtgcagca accattcaac ctccctatgg acagctgcgt
601 ggccaccaag tccctgagtc ccggacacac gctgatcccc agctcagctg taactccccc
661 ggagtcaccc cagtcggatt ccctgggctc cacctactcc atcaatgggc tcctgggcat
721 cgctcagcct ggcagcgaca agaggaaaat ggatgacagt gatcaggata gctgccgact
781 aagcattgac tcacagagca gcagcagcgg accccgaaag caccttcgca cggatgcctt
841 cagccagcac cacctcgagc cgctcgagtg cccatttgag cggcagcact acccagaggc
901 ctatgcctcc cccagccaca ccaaaggcga gcagggcctc tacccgctgc ccttgctcaa
961 cagcaccctg gacgacggga aggccaccct gaccccttcc aacacgccac tggggcgcaa
1021 cctctcgact caccagacct accccgtggt ggcagatcct cactcaccct tcgccataaa
1081 gcaggaaacc cccgaggtgt ccagttctag ctccacccct tcctctttat ctagctccgc
1141 ctttttggat ctgcagcaag tcggctccgg ggtcccgccc ttcaatgcct ttccccatgc
1201 tgcctccgtg tacgggcagt tcacgggcca ggccctcctc tcagggcgag agatggtggg
1261 gcccacgctg cccggatacc caccccacat ccccaccagc ggacagggca gctatgcctc
1321 ctctgccatc gcaggcatgg tggcaggaag tgaatactct ggcaatgcct atggccacac
1381 cccctactcc tcctacagcg aggcctggcg cttccccaac tccagcttgc tgagttcccc
1441 atattattac agttccacat caaggccgag tgcaccgccc accactgcca cggcctttga
1501 ccatctgtag ttgccatggg gacagtggga gcgactgagc aacaggagga ctcagcctgg
1561 gacaggcccc agagagtcac acaaaggaat ctttatttat tacatgaaaa ataaccacaa
1621 gtccagcatt gcggcacact ccctgtgtgg ttaatttaat gaaccatgaa agacaggatg
1681 accttggaca aggccaaact gtcctccaag actccttaat gaggggcagg agtcccaggg
1741 aaagagaacc atgccatgct gaaaaagaca aaattgaaga agaaatgtag cccccagccg
1801 gtacccacca aaggagagaa gaagcaatag ccgaggaact tggggggatg gcgaatggtt
1861 cctgcccggg cccaaggggt gcacagggca cctccatggc tccattatta acacaactct
1921 agcaattatg gaccataagc acttccctcc agcccacaag tcacagcctg gtgccgaggc
1981 tctcctcacc agccacccag ggagtcacct ccctcagcct cccgcctgcc ccacacggag
2041 gctctggctg tcctctttct ccactccatt tgcttggctc tttctacacc tccctcttgg
2101 gcatgggctg agggctggag cgagtccctc agaaattcca ccaggctgtc agctgacctc
2161 ttttgcctgc tgctgtgaag gtatagcacc accccaggtc ctcctgcagt gcggcatccc
2221 cttggcagct gccgtcagcc aggccagccc cagggagctt aaaacagaca ttccacaggg
2281 cctgggcccc tgggaggtga ggtgtggtgt gcggcttcac ccagggcaga acaaggcaga
2341 atcgcaggaa acccgcttcc ccttcctgac agctcctgcc aagccaaatg tgcttcctgc
2401 agctcacgcc caccagctac tgaagggacc caaggcaccc cctgaagcca gcgatagagg
2461 gtccctctct gctccccagc agctcctgcc cccaaggcct gactgtatat actgtcaatg
2521 aaactttgtt tgggtcaagc ttccttcttt ctacccccca gactttggcc tctgagtgaa
2581 atgtctctct ttgccctgtg gggcttctct ccttgatgct tctttctttt tttaaagaca
2641 acctgccatt accacatgac tcaataaacc attgctcttc aaaaaaaaaa aaaaaaaa
//