LOCUS BC001055 1332 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens claudin 7, mRNA (cDNA clone MGC:1858 IMAGE:3504311),
complete cds.
ACCESSION BC001055
VERSION BC001055.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1332)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1332)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001055.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: o Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222214.
FEATURES Location/Qualifiers
source 1..1332
/db_xref="H-InvDB:HIT000030105"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1858 IMAGE:3504311"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1332
/gene="CLDN7"
/gene_synonym="claudin-1"
/gene_synonym="Hs.84359"
/db_xref="GeneID:1366"
/db_xref="HGNC:HGNC:2049"
/db_xref="MIM:609131"
CDS 427..1062
/gene="CLDN7"
/gene_synonym="claudin-1"
/gene_synonym="Hs.84359"
/codon_start=1
/product="claudin 7"
/protein_id="AAH01055.1"
/db_xref="GeneID:1366"
/db_xref="HGNC:HGNC:2049"
/db_xref="MIM:609131"
/translation="MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQ
AMYKGLWMDCVTQSTGMMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGM
KCTRCGGDDKVKKARIAMGGGIIFIVAGLATLVACSWYGHQIVTDFYNPLIPTNIKYE
FGPAIFIGWAGSALVILGGALLSCSCPGNESKAGYRAPRSYPKSNSSKEYV"
BASE COUNT 264 a 363 c 391 g 314 t
ORIGIN
1 ctgctggctc acctccgagc cacctctgct gcgcaccgca gcctcggacc tacagcccag
61 gatactttgg gacttgccgg cgctcagaaa cgcgcccaga cggcccctcc accttttgtt
121 tgcctagggt cgccgagagc gcccggaggg aaccgcctgg ccttcgggga ccaccaattt
181 tgtctggaac caccctcccg gcgtatccta ctccctgtgc cgcgaggcca tcgcttcact
241 ggaggggtcg atttgtgtgt agtttggtga caagatttgc attcacctgg cccaaaccct
301 ttttgtctct ttgggtgacc ggaaaactcc acctcaagtt ttcttttgtg gggctgcccc
361 ccaagtgtcg tttgttttac tgtagggtct cccgcccggc gcccccagtg ttttctgagg
421 gcggaaatgg ccaattcggg cctgcagttg ctgggcttct ccatggccct gctgggctgg
481 gtgggtctgg tggcctgcac cgccatcccg cagtggcaga tgagctccta tgcgggtgac
541 aacatcatca cggcccaggc catgtacaag gggctgtgga tggactgcgt cacgcagagc
601 acggggatga tgagctgcaa aatgtacgac tcggtgctcg ccctgtccgc ggccttgcag
661 gccactcgag ccctaatggt ggtctccctg gtgctgggct tcctggccat gtttgtggcc
721 acgatgggca tgaagtgcac gcgctgtggg ggagacgaca aagtgaagaa ggcccgtata
781 gccatgggtg gaggcataat tttcatcgtg gcaggtcttg ccaccttggt agcttgctcc
841 tggtatggcc atcagattgt cacagacttt tataaccctt tgatccctac caacattaag
901 tatgagtttg gccctgccat ctttattggc tgggcagggt ctgccctagt catcctggga
961 ggtgcactgc tctcctgttc ctgtcctggg aatgagagca aggctgggta ccgtgcaccc
1021 cgctcttacc ctaagtccaa ctcttccaag gagtatgtgt gacctgggat ctccttgccc
1081 cagcctgaca ggctatggga gtgtctagat gcctgaaagg gcctggggct gagctcagcc
1141 tgtgggcagg gtgccggaca aaggcctcct ggtcactctg tccctgcact ccatgtatag
1201 tcctcttggg ttgggggtgg gggggtgccg ttggtgggag agacaaaaag agggagagtg
1261 tgctttttgt acagtaataa aaaataagta ttgggaaaaa aaaaaaaaaa aaaaaaaaaa
1321 aaaaaaaaaa aa
//