LOCUS BC001034 645 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens superoxide dismutase 1, soluble, mRNA (cDNA clone
MGC:2325 IMAGE:3140145), complete cds.
ACCESSION BC001034
VERSION BC001034.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 645)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 645)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: a Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48762945.
FEATURES Location/Qualifiers
source 1..645
/db_xref="H-InvDB:HIT000030086"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2325 IMAGE:3140145"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..645
/gene="SOD1"
/gene_synonym="homodimer"
/gene_synonym="IPOA"
/gene_synonym="SOD"
/db_xref="GeneID:6647"
/db_xref="HGNC:HGNC:11179"
/db_xref="MIM:147450"
CDS 68..532
/gene="SOD1"
/gene_synonym="homodimer"
/gene_synonym="IPOA"
/gene_synonym="SOD"
/codon_start=1
/product="superoxide dismutase 1, soluble"
/protein_id="AAH01034.1"
/db_xref="GeneID:6647"
/db_xref="HGNC:HGNC:11179"
/db_xref="MIM:147450"
/translation="MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLH
GFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED
SVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ"
BASE COUNT 185 a 129 c 181 g 150 t
ORIGIN
1 ctcctgcagc gtctggggtt tccgttgcag tcctcggaac caggacctcg gcgtggccta
61 gcgagttatg gcgacgaagg ccgtgtgcgt gctgaagggc gacggcccag tgcagggcat
121 catcaatttc gagcagaagg aaagtaatgg accagtgaag gtgtggggaa gcattaaagg
181 actgactgaa ggcctgcatg gattccatgt tcatgagttt ggagataata cagcaggctg
241 taccagtgca ggtcctcact ttaatcctct atccagaaaa cacggtgggc caaaggatga
301 agagaggcat gttggagact tgggcaatgt gactgctgac aaagatggtg tggccgatgt
361 gtctattgaa gattctgtga tctcactctc aggagaccat tgcatcattg gccgcacact
421 ggtggtccat gaaaaagcag atgacttggg caaaggtgga aatgaagaaa gtacaaagac
481 aggaaacgct ggaagtcgtt tggcttgtgg tgtaattggg atcgcccaat aaacattccc
541 ttggatgtag tctgaggccc cttaactcat ctgttatcct gctagctgta gaaatgtatc
601 ctgataaaca ttaaacactg taatcttaaa aaaaaaaaaa aaaaa
//