LOCUS BC000985 1314 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SRY (sex determining region Y)-box 15, mRNA (cDNA
clone MGC:5138 IMAGE:3447385), complete cds.
ACCESSION BC000985
VERSION BC000985.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1314)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1314)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Apr 30, 2001 this sequence version replaced BC000985.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: k Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5902105.
FEATURES Location/Qualifiers
source 1..1314
/db_xref="H-InvDB:HIT000030045"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5138 IMAGE:3447385"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1314
/gene="SOX15"
/gene_synonym="SOX26"
/gene_synonym="SOX27"
/db_xref="GeneID:6665"
/db_xref="HGNC:HGNC:11196"
/db_xref="MIM:601297"
CDS 399..1100
/gene="SOX15"
/gene_synonym="SOX26"
/gene_synonym="SOX27"
/codon_start=1
/product="SRY (sex determining region Y)-box 15"
/protein_id="AAH00985.1"
/db_xref="GeneID:6665"
/db_xref="HGNC:HGNC:11196"
/db_xref="MIM:601297"
/translation="MALPGSSQDQAWSLEPPAATAAASSSSGPQEREGAGSPAAPGTL
PLEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPFVEEA
KRLRARHLRDYPDYKYRPRRKAKSSGAGPSRCGQGRGNLASGGPLWGPGYATTQPSRG
FGYRPPSYSTAYLPGSYGSSHCKLEAPSPCSLPQSDPRLQGELLPTYTHYLPPGSPTP
YNPPLAGAPMPLTHL"
BASE COUNT 274 a 441 c 365 g 234 t
ORIGIN
1 gtgggagagg tctggcctat ccgcgcctgg cagctgtcgg aactccggag accacaaagg
61 ggtttatggt ttaccccctc cacggaaggt cggtctgatc gcagctgcgg gtcggggaga
121 gggaccgggg gtcccccagt cagtaggcct cagaacacct cttcagtgcc ggggcaccag
181 acagcggatt ttgcattcga ctctccccaa agtgtgccga acaggttgga agcaaaggct
241 ccggtttaag ctctgggctt ggggataaaa tacacttttt aaggacccaa gttcctcggc
301 aacgactcca gactgggaag acctttccat tttcaggatc gacgcttcac gttgagggga
361 gggcattcag gacgccctct taaggcttct cccaacccat ggcgctacca ggctcctcac
421 aggaccaggc ctggagcctg gagcctccgg ctgccacggc tgctgcctcc tcatcttcgg
481 gaccccagga gcgggagggc gctgggagcc ccgcggcccc cgggacgctg cccctggaga
541 aggtgaagcg gccgatgaac gcgttcatgg tgtggagctc cgctcagcgc cgccagatgg
601 cgcagcagaa ccccaagatg cacaactccg agatctccaa gcgcctgggc gcgcagtgga
661 agctgctgga cgaggacgag aagcggccct tcgtggagga ggccaagcgg ctccgcgccc
721 gacacctgcg cgactacccc gactacaagt accggcctcg gcgcaaggcc aagagctcgg
781 gcgccggacc ttcccgctgc ggacagggaa gaggcaacct ggccagcggc ggcccgctct
841 gggggccggg gtacgcgacc acccaaccga gcagaggctt tgggtacaga ccccccagct
901 actcgacagc ctacctgcct ggcagctatg gctcttccca ctgcaaactg gaagccccct
961 caccgtgctc cctccctcag agtgacccta ggctccaggg ggaactgctg cccacctata
1021 cccactacct gccccctggc tctcccactc catacaaccc tccccttgct ggtgccccca
1081 tgcccctaac ccacctctaa ccctcatgga cgcagacctc acgggacggg cctcatcctc
1141 cttttttaat ccagcagcat cccctacccc aggctgtcaa ccctttctcc tgttggacta
1201 cagttcagag gcagcctgca gtcctcccat gatagccagg gagagccgca caacatacaa
1261 ttatattttt ggtagtatta aacagttttg tattattcaa aaaaaaaaaa aaaa
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