LOCUS BC000975 2886 bp mRNA linear HUM 18-DEC-2008
DEFINITION Homo sapiens hect domain and RLD 2 pseudogene 3, mRNA (cDNA clone
IMAGE:3448306).
ACCESSION BC000975
VERSION BC000975.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2886)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2886)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Feb 14, 2001 this sequence version replaced BC000975.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: g Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2886
/db_xref="H-InvDB:HIT000085941"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3448306"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 754 a 709 c 736 g 687 t
ORIGIN
1 agccagtgga tgtggaaaag agaaagtgcc tactaaaaca gttggagaga gcagaggttc
61 gcctggaagg gatagataca attttaaaat tgtatctggt gagcaagaat ttcttacttc
121 catctgtgcc gtatgcgatg ttttgtggat ggcaaagact tattcctgag ggaatcgata
181 taggggaacc tcttactgat tgtttaaagg atgttgattt gatcccgcct tttaatcgga
241 tgctgctgga agtcaccttt ggcaagctgt acgcttgggc tgttcagaac attcgaaatg
301 ttttggtgga tgccagtgcc aaatttaaag agcttggtat ccagccggtt cccctgcaaa
361 ccatcaccaa tgagaaccca tcgggaccga gcttggggac catcccgcaa gcccacttcc
421 tcctggtgat gctcagcatg ctcaccctgc agcacagcgc aaacaacctt gacctcctgc
481 tcaattccgg cacgctggcc ctcgctcaga cggcactgcg cctgattggc cccagttgtg
541 acagcgttga ggaagatatg aatgcttctg ctcaaggtgc ttctgccaca gttttggaag
601 aaacaaggaa ggaaacggct cctgtgcagc tccctgtttc agggccagaa ctggctgcca
661 tgatgaagat tggaacaagg gtcatgagag gtgtggactg gaaatggggc gatcaggata
721 ggcctcctcc aggcctaggc cgagtgattg gtgagctggg agaggacggg tggataagag
781 tccagtggga cacaggcagc accaactcct acaggatggg gaaagaagga aattacgaca
841 agctggcaga gctgccagcc cctgcacagc cctcagcaga ggattcggac acagaggacg
901 actctgaagc cgaacaaact gaaaggaaca ttcaccccac tgcaatgatg tttaccagca
961 ctattaactt actgcagact ctttgtctgt ctgctggagt tcatgctgag atcatgcaga
1021 gtgaagccac caagacttta tgcggactgc tgcaaatgct ggtgtacagg gagcaacacc
1081 ggagctggtg cacgctgggg tttgtgcaga gcatcgctct cacgctgcag gtgtgcggca
1141 ccctcagctc cctgcagtgg atcacgctgc tcatgaaggt cgtggaaggg cacgcaccct
1201 tcactgccac ctcgctgcag aggcagatct tagctgtgca tttgttgcaa gcagtccttc
1261 cgtcatggga caagaccgaa agggcgaggg acatgaaatg cctcatggag aagctgtttg
1321 acttcttggg gagcttgctc actatgtgct cctctgacgt gccgttactc agagagtcca
1381 cgctgaggcg gcgcagggtg tgcccgcagg cctcgctgac tgccacccac agcagcacac
1441 tggcggagga ggtggtggca ctgctgcaca cgctgcactc cctgactcag tggaatgggc
1501 tcatcaacaa gtacatcaac tcccagctcc gctccatcac ccacagcttt gcgggaaggc
1561 cttccaaagg ggcccagtta gaggactact tccctgattc cgagaaccct gaagtggggg
1621 gcctcatggc ggtcctggct gtggttggag gcatcgatgg tcgcctgtgc ctgggcggcc
1681 aagttgtgca cgatgacttt ggagaagtca ccatgactcg catcaccctg aagggcaaaa
1741 tcaccgtgca gttctctgac atgcggacgt gtcacgtttg cccattgaat cagctgaaac
1801 cactccctgc cgtggccttt aatgtgaaca acctgccctt cacagagccc atgctgtctg
1861 tctgggctca gttggtgaac ctcgctggaa gcaagttaga aaagcacaaa ataaagaaat
1921 cgactaaaca ggcctttgca ggacaagtgg acctggacct gctgcggtgc cagcagttga
1981 agctatacat cctgaaagca ggtcgggcgc tgttctccca ccaggataaa ctgcggcaga
2041 tcctgtctca gccagctgtt caggagactg gaactgttca cacagatgat ggagcagtgg
2101 tatcacctga ccttggggac atgtctcctg aagggccgca gccccccatg atcctcttgc
2161 agcagctgct ggcctcggcc acccagccgt ctcctgtgaa ggccatattt gataaacagg
2221 aacttgagga aagaatgtcc agatgttgtt tttggagaag aagaactaca aagttagagc
2281 aaatactctt atttataaga agaatgaact cagtgtgtga gaaggagaat acaaatgcaa
2341 cagcctcaaa ttagcagtgg atgcctcctg ggcttctgca accgctttcc acgggttcca
2401 ccagatggct agctggtaat gacccagaca cctctgagta aactcccaga aagcctgaca
2461 aatatgttgc aaacttagcc atatgtagag tggctacacc acatttgcat cgctctctta
2521 acagcatgac cttctttaat agtgatcact tccattttta ggccctttat gcattacttt
2581 tgtcatttta tattgcttct ttttttctga tccttgcaaa aaccctgcca agaaagcaag
2641 aaaatatgtt tccccctcag gacctggaca acatcagata gaatgtgtca cataaatatg
2701 tattcataat gaaagtttca taggtattaa aaatgaaagc tcaaaatggc taggtgatat
2761 tcctcaattc atatgaacat agatctctta ccttttttct tgatattata ttgaatatgt
2821 aaagatattt gaaatagttt atatatgagt aattaaacca gctcatcttt taaaaaaaaa
2881 aaaaaa
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