LOCUS BC000905 1433 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAB1A, member RAS oncogene family, mRNA (cDNA clone
MGC:5233 IMAGE:2900705), complete cds.
ACCESSION BC000905
VERSION BC000905.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1433)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1433)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Jul 12, 2001 this sequence version replaced BC000905.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: k Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41350195.
FEATURES Location/Qualifiers
source 1..1433
/db_xref="H-InvDB:HIT000029994"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5233 IMAGE:2900705"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1433
/gene="RAB1A"
/gene_synonym="DKFZP564B163"
/db_xref="GeneID:5861"
/db_xref="HGNC:HGNC:9758"
/db_xref="MIM:179508"
CDS 179..796
/gene="RAB1A"
/gene_synonym="DKFZP564B163"
/codon_start=1
/product="RAB1A, member RAS oncogene family"
/protein_id="AAH00905.1"
/db_xref="GeneID:5861"
/db_xref="HGNC:HGNC:9758"
/db_xref="MIM:179508"
/translation="MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTI
GVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNV
KQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATN
VEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGCC"
BASE COUNT 432 a 254 c 326 g 421 t
ORIGIN
1 gcgatagctg agtggcggcg gctgctgatt gtgttctagg ggacggagta ggggaagacg
61 tttgctctcc cggaacagcc tatctcattc ctttctttcg attacccgtg gcgcggagag
121 tcagggcggc ggctgcggca gcaagggcgg cggtggcggc ggcggcagct gcagtgacat
181 gtccagcatg aatcccgaat atgattattt attcaagtta cttctgattg gcgactcagg
241 ggttggaaag tcttgccttc ttcttaggtt tgcagatgat acatatacag aaagctacat
301 cagcacaatt ggtgtggatt tcaaaataag aactatagag ttagacggga aaacaatcaa
361 gcttcaaata tgggacacag caggccagga aagatttcga acaatcacct ccagttatta
421 cagaggagcc catggcatca tagttgtgta tgatgtgaca gatcaggagt ccttcaataa
481 tgttaaacag tggctgcagg aaatagatcg ttatgccagt gaaaatgtca acaaattgtt
541 ggtagggaac aaatgtgatc tgaccacaaa gaaagtagta gactacacaa cagcgaagga
601 atttgctgat tcccttggaa ttccgttttt ggaaaccagt gctaagaatg caacgaatgt
661 agaacagtct ttcatgacga tggcagctga gattaaaaag cgaatgggtc ccggagcaac
721 agctggtggt gctgagaagt ccaatgttaa aattcagagc actccagtca agcagtcagg
781 tggaggttgc tgctaaaatt tgcctccatc cttttctcac agcaatgaat ttgcaatctg
841 aacccaagtg aaaaaacaaa attgcctgaa ttgtactgta tgtagctgca ctacaacaga
901 ttcttaccgt ctccacaaag gtcagagatt gtaaatggtc aatactgact ttttttttat
961 tcccttgact caagacagct aacttcattt tcagaactgt tttaaacctt tgtgtgctgg
1021 tttataaaat aatgtgtgta atccttgttg ctttcctgat accagactgt ttcccgtggt
1081 tggttagaat atattttgtt ttgatgttta tattggcatg tttagatgtc aggtttagtc
1141 ttctgaagat gaagttcagc cattttgtat caaacagcac aagcagtgtc tgtcactttc
1201 catgcataaa gtttagtgag atgttatatg taagatctga tttgctagtt cttccttgta
1261 gagttataaa tggaaagatt acactatctg attaatagtt tcttcatact ctgcatataa
1321 tttgtggctg cagaatattg taatttgttg cacactatgt aacaaaacaa ctgaagatat
1381 gtttaataaa tattgtactt attggaagta aaaaaaaaaa aaaaaaaaaa aaa
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