LOCUS BC000880 1003 bp mRNA linear HUM 30-DEC-2006
DEFINITION Homo sapiens vacuolar protein sorting 29 homolog (S. cerevisiae),
mRNA (cDNA clone MGC:4870 IMAGE:3461977), complete cds.
ACCESSION BC000880
VERSION BC000880.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1003)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1003)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: h Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17402910.
FEATURES Location/Qualifiers
source 1..1003
/db_xref="H-InvDB:HIT000029973"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4870 IMAGE:3461977"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1003
/gene="VPS29"
/gene_synonym="DC15"
/gene_synonym="DC7"
/gene_synonym="DKFZp564F0223"
/gene_synonym="PEP11"
/db_xref="GeneID:51699"
/db_xref="HGNC:HGNC:14340"
/db_xref="MIM:606932"
CDS 48..608
/gene="VPS29"
/gene_synonym="DC15"
/gene_synonym="DC7"
/gene_synonym="DKFZp564F0223"
/gene_synonym="PEP11"
/codon_start=1
/product="vacuolar protein sorting 29 homolog (S.
cerevisiae)"
/protein_id="AAH00880.1"
/db_xref="GeneID:51699"
/db_xref="HGNC:HGNC:14340"
/db_xref="MIM:606932"
/translation="MAGHRLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNL
CTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMAS
LALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQ
ASTVVTYVYQLIGDDVKVERIEYKKP"
BASE COUNT 323 a 176 c 200 g 304 t
ORIGIN
1 aagagggcgg cgacggtggt ggtgactgag cggagcccgg tgacaggatg gctgggcaca
61 gattggtgtt ggtattagga gatctgcaca tcccacaccg gtgcaacagt ttgccagcta
121 aattcaaaaa actcctggtg ccaggaaaaa ttcagcacat tctctgcaca ggaaaccttt
181 gcaccaaaga gagttatgac tatctcaaga ctctggctgg tgatgttcat attgtgagag
241 gagacttcga tgagaatctg aattatccag aacagaaagt tgtgactgtt ggacagttca
301 aaattggtct gatccatgga catcaagtta ttccatgggg agatatggcc agcttagccc
361 tgttgcagag gcaatttgat gtggacattc ttatctcggg acacacacac aaatttgaag
421 catttgagca tgaaaataaa ttctacatta atccaggttc tgccactggg gcatataatg
481 ccttggaaac aaacattatt ccatcatttg tgttgatgga tatccaggct tctacagtgg
541 tcacctatgt gtatcagcta attggagatg atgtgaaagt agaacgaatc gaatacaaaa
601 aaccttaaag ccaggcctgt cttgatgatt tttggttttt tttcattgtc ctgttgaaat
661 caagtaatta aacatttaag agccacaaaa ttgtatcact tttataatat tttgcagtaa
721 aatataatac catcttctct gttaatacat aattgctcca agcttcctgt aaactataag
781 aatatattta gtttacagta tatggattct atgaaaaaat gtccacaaca cagtaattgg
841 tcacttgtta agaaaaattt atccttgtaa gtatcttcaa agttgatatt tggaacttta
901 ttccaaaagt agtgcatgtg gagaaagaat ctagactttc ttgtatacat ttttctcttc
961 tccagtaata aacaattacc tttcatttaa aaaaaaaaaa aaa
//