LOCUS BC000776 3181 bp mRNA linear HUM 04-NOV-2003
DEFINITION Homo sapiens synaptic vesicle glycoprotein 2A, mRNA (cDNA clone
IMAGE:3509807), partial cds.
ACCESSION BC000776
VERSION BC000776.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3181)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3181)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC000776.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: l Column: 18.
FEATURES Location/Qualifiers
source 1..3181
/db_xref="H-InvDB:HIT000085872"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3509807"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3181
/gene="SV2A"
/gene_synonym="KIAA0736"
/gene_synonym="SV2"
/db_xref="GeneID:9900"
/db_xref="MIM:185860"
CDS <1..1815
/gene="SV2A"
/gene_synonym="KIAA0736"
/gene_synonym="SV2"
/codon_start=1
/product="SV2A protein"
/protein_id="AAH00776.2"
/db_xref="GeneID:9900"
/db_xref="MIM:185860"
/translation="AQRRKEREELAQQYEAILRECGHGRFQWTLYFVLGLALMADGVE
VFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLS
VNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLSWLCM
FWMIGGVYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPSVFAIGALTTQPE
SPRFFLENGKHDEAWMVLKQVHDTNMRAKGHPERVFSVTHIKTIHQEDELIEIQSDTG
TWYQRWGVRALSLGGQVWGNFLSCFGPEYRRITLMMMGVWFTMSFSYYGLTVWFPDMI
RHLQAVDYASRTKVFPGERVEHVTFNFTLENQIHRGGQYFNDKFIGLRLKSVSFEDSL
FEECYFEDVTSSNTFFRNCTFINTVFYNTDLFEYKFVNSRLINSTFLHNKEGCPLDVT
GTGEGAYMVYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVMSCVSCFFLSFGN
SESAMIALLCLFGGVSIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIF
TSFVGITKAAPILFASAALALGSSLALKLPETRGQVLQ"
misc_feature 76..717
/gene="SV2A"
/gene_synonym="KIAA0736"
/gene_synonym="SV2"
/note="sugar_tr; Region: Sugar (and other) transporter"
/db_xref="CDD:pfam00083"
misc_feature 1372..1713
/gene="SV2A"
/gene_synonym="KIAA0736"
/gene_synonym="SV2"
/note="sugar_tr; Region: Sugar (and other) transporter"
/db_xref="CDD:pfam00083"
BASE COUNT 660 a 848 c 863 g 810 t
ORIGIN
1 gcacaacgac ggaaagaacg agaagaactg gcccaacagt atgaagccat cctacgggag
61 tgtggccacg gccgcttcca gtggacactg tattttgtgc ttggtctggc gctgatggct
121 gacggtgtgg aggtctttgt ggtgggcttc gtgctgccca gcgctgagaa agacatgtgc
181 ctgtccgact ccaacaaagg catgctaggc ctcatcgtct acctgggcat gatggtggga
241 gccttcctct ggggaggtct ggctgaccgg ctgggtcgga ggcagtgtct gctcatctcg
301 ctctcagtca acagcgtctt cgccttcttc tcatcttttg tccagggtta cggcactttc
361 ctcttctgcc gcctactttc tggggttggg attggagggt ccatccccat tgtcttctcc
421 tatttctccg agtttctggc ccaggagaaa cgaggggagc atttgagctg gctctgcatg
481 ttttggatga ttggtggcgt gtacgcagct gctatggcct gggccatcat cccccactat
541 gggtggagtt ttcagatggg ttctgcctac cagttccata gctggagggt cttcgtcctc
601 gtctgcgcct ttccttctgt gtttgccatt ggggctctga ccacgcagcc tgagagcccc
661 cgtttcttcc tagagaatgg aaagcatgat gaggcctgga tggtgctgaa gcaggtccat
721 gataccaaca tgcgagccaa aggacatcct gagcgagtgt tctcagtaac ccacattaag
781 acgattcatc aggaggatga attgattgag atccagtcgg acacagggac ctggtaccag
841 cgctgggggg tccgggcctt gagcctaggg gggcaggttt gggggaattt tctctcctgt
901 tttggtcccg aatatcggcg catcactctg atgatgatgg gtgtgtggtt caccatgtca
961 ttcagctact atggcctgac cgtctggttt cctgacatga tccgccatct ccaggcagtg
1021 gactacgcat cccgcaccaa agtgttcccc ggggagcgcg tagagcatgt aacttttaac
1081 ttcacgttgg agaatcagat ccaccgaggc gggcagtact tcaatgacaa gttcattggg
1141 ctgcggctca agtcagtgtc ctttgaggat tccctgtttg aagagtgtta ttttgaggat
1201 gtcacatcca gcaacacgtt tttccgcaac tgcacattca tcaacactgt gttctataac
1261 actgacctgt tcgagtacaa gtttgtgaac agccgtctga taaacagtac attcctgcac
1321 aacaaggagg gctgcccgct agacgtgaca gggacgggcg aaggtgccta catggtatac
1381 tttgtgagct tcctggggac actggcagtg cttcctggga atatcgtgtc tgccctgctc
1441 atggacaaga tcggcaggct cagaatgctt gctggctcca gcgtgatgtc ctgtgtctcc
1501 tgcttcttcc tgtcttttgg gaacagtgag tcggccatga tcgctctgct ctgccttttt
1561 ggcggggtca gcattgcatc ctggaatgcg ctggacgtgt tgactgttga actctacccc
1621 tcagacaaga ggaccacagc ttttggcttc ctgaatgccc tgtgtaagct ggcagctgtg
1681 ctggggatca gcattttcac atccttcgtg ggaatcacca aggctgcacc catcctcttt
1741 gcctcagctg cccttgccct tggcagctct ctggccctga agctgcctga gacccggggg
1801 caggtgctgc agtgaagggg tctctagggc tttgggattg gcaggcacac tgtgagacca
1861 acaactcctt ccttcccctc cctgccctgc catcctgacc tccagagccc tcactcccca
1921 ctccccgtgt ttggtgtctt agctgtgtgt gcgtgtgcgt gtgcatgtgt gtaaaccccg
1981 tgggcaggga ctacagggaa ggctccttca tcccagtttt gagatgaagc tgtactcccc
2041 atttcccact gcccttgact ttgcacaaga gaaggctgag ccccatcctt ctccccctgt
2101 tagagagggg cccttgcttc cctgttccag gggttccaga ataggcttcc tgccttcccc
2161 atcattccct ctgcctaggc cctggtgaaa ccacaggtat gcaattatgc taggggctgg
2221 ggctctggtg tagaccatgg accaaaagaa cttcttagag tctgaagagt gggcctcggg
2281 tgccctctca catctcctgt tggatgctgg gggagaagca ataaacctca gccctctggc
2341 ctccactttc ctctcaattt gggctgcaaa tatgaagcct gaattttatg aaattagctt
2401 tctgattctt atttattaat agattaagtt ctgaggcagc tccgcaggac tgtgtgtgaa
2461 tgtgtatgta tacttacata tgtgtgtgca tgtgccatgg ggcggggggt atcactatac
2521 tgtcctcaaa tataagccaa gggtaatttc agcggatgca cacacaaccc tgcctcccac
2581 agttcctccc ctaatctggt ttctgtgttg agcctgggat ggaggagccc taggccagcc
2641 tgggataaga gtcccacagt ctagggagat ctgagggcat ccgacaaggc ccatctcctt
2701 ccctcctcaa gaagcagagg cctcctctgg agtgagaggc tccacccact acagcacagg
2761 cgggaatagc acagctgccc tcccatgctc cctacctgtc ccctcacagg gaggggagca
2821 ggggagggaa agaaaccagg catctggtca aaccagcaga tcaaaaagca caaagagctg
2881 gggcagaggc aggaagcagg ggccctcctg gcagctcctc tgagtgggga gaggttgggc
2941 agtgagtgag ggacccctaa tgcagggact agaagcctca gtttccccat tttacccttc
3001 cacacaatag cctctgtagg ttaggctgcc ccatcccacc ctactctgtg tggctgcttt
3061 ctttggtgcc ctcccctcac cccactgtag ctgtgacgtg ttgtagtttt tagatgtttg
3121 taaaatgttt aaaaaaatgt taaaaggaaa aaagtgaaaa taacaaaaaa aaaaaaaaaa
3181 a
//