LOCUS BC000724 2078 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal accessory protein
1, mRNA (cDNA clone MGC:1570 IMAGE:3506925), complete cds.
ACCESSION BC000724
VERSION BC000724.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2078)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2078)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC000724.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: g Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37577154.
FEATURES Location/Qualifiers
source 1..2078
/db_xref="H-InvDB:HIT000029869"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1570 IMAGE:3506925"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2078
/gene="ATP6AP1"
/gene_synonym="16A"
/gene_synonym="Ac45"
/gene_synonym="CF2"
/gene_synonym="ORF"
/gene_synonym="VATPS1"
/gene_synonym="XAP-3"
/gene_synonym="XAP3"
/db_xref="GeneID:537"
/db_xref="HGNC:HGNC:868"
/db_xref="MIM:300197"
CDS 19..1431
/gene="ATP6AP1"
/gene_synonym="16A"
/gene_synonym="Ac45"
/gene_synonym="CF2"
/gene_synonym="ORF"
/gene_synonym="VATPS1"
/gene_synonym="XAP-3"
/gene_synonym="XAP3"
/codon_start=1
/product="ATPase, H+ transporting, lysosomal accessory
protein 1"
/protein_id="AAH00724.1"
/db_xref="GeneID:537"
/db_xref="HGNC:HGNC:868"
/db_xref="MIM:300197"
/translation="MMAAMATARVRMGPRCAQALWRMPWLPVFLSLAAAAAAAAAEQQ
VPLVLWSSDRDLWAPAADTHEGHITSDLQLSTYLDPALELGPRNVLLFLQDKLSIEDF
TAYGGVFGNKQDSAFSNLENALDLAPSSLVLPAVDWYAVSTLTTYLQEKLGASPLHVD
LATLRELKLNASLPALLLIRLPYTASSGLMAPREVLTGNDEVIGQVLSTLKSEDVPYT
AALTAVRPSRVARDVAVVAGGLGRQLLQKQPVSPVIHPPVSYNDTAPRILFWAQNFSV
AYKDQWEDLTPLTFGVQELNLTGSFWNDSFARLSLTYERLFGTTVTFKFILANRLYPV
SARHWFTMERLEVHSNGSVAYFNASQVTGPSIYSFHCEYVSSLSKKGSLLVARTQPSP
WQMMLQDFQIQAFNVMGEQFSYASDCASFFSPGIWMGLLTSLFMLFIFTYGLHMILSL
KTMDRFDDHKGPTISLTQIV"
BASE COUNT 395 a 618 c 573 g 492 t
ORIGIN
1 gcagtggagg ctgaggctat gatggcggcc atggcgacgg ctcgagtgcg gatggggccg
61 cggtgcgccc aggcgctctg gcgcatgccg tggctgccgg tgtttttgtc gttggcggcg
121 gcggcggcgg cggcagcggc ggagcagcag gtcccgctgg tgctgtggtc gagtgaccgg
181 gacttgtggg ctcctgcggc cgacactcat gaaggccaca tcaccagcga cttgcagctc
241 tctacctact tagatcccgc cctggagctg ggtcccagga atgtgctgct gttcctgcag
301 gacaagctga gcattgagga tttcacagca tatggcggtg tgtttggaaa caagcaggac
361 agcgcctttt ctaacctaga gaatgccctg gacctggccc cctcctcact ggtgcttcct
421 gccgtcgact ggtatgcagt cagcactctg accacttacc tgcaggagaa gctcggggcc
481 agccccttgc atgtggacct ggccaccctg cgggagctga agctcaatgc cagcctccct
541 gctctgctgc tcattcgcct gccctacaca gccagctctg gtctgatggc acccagggaa
601 gtcctcacag gcaacgatga ggtcatcggg caggtcctga gcacactcaa gtccgaagat
661 gtcccataca cagcggccct cacagcggtc cgcccttcca gggtggcccg tgatgtagcc
721 gtggtggccg gagggctagg tcgccagctg ctacaaaaac agccagtatc acctgtgatc
781 catcctcctg tgagttacaa tgacaccgct ccccggatcc tgttctgggc ccaaaacttc
841 tctgtggcgt acaaggacca gtgggaggac ctgactcccc tcacctttgg ggtgcaggaa
901 ctcaacctga ctggctcctt ctggaatgac tcctttgcca ggctctcact gacctatgaa
961 cgactctttg gtaccacagt gacattcaag ttcattctgg ccaaccgcct ctacccagtg
1021 tctgcccggc actggtttac catggagcgc ctcgaagtcc acagcaatgg ctccgtcgcc
1081 tacttcaatg cttcccaggt cacagggccc agcatctact ccttccactg cgagtatgtc
1141 agcagcctga gcaagaaggg tagtctcctc gtggcccgca cgcagccctc tccctggcag
1201 atgatgcttc aggacttcca gatccaggct ttcaacgtaa tgggggagca gttctcctac
1261 gccagcgact gtgccagctt cttctccccc ggcatctgga tggggctgct cacctccctg
1321 ttcatgctct tcatcttcac ctatggcctg cacatgatcc tcagcctcaa gaccatggat
1381 cgctttgatg accacaaggg ccccactatt tctttgaccc agattgtgtg accctgtgcc
1441 agtggggggg ttgagggtgg gacggtgtcc gtgttgttgc tttcccaccc tgcagcgcac
1501 tggactgaag agcttccctc ttcctactgc agcatgaact gcaagctccc ctcagcccat
1561 cttgctccct cttcagcccg ctgaggagct ttcttgggct gcccccatct ctcccaacaa
1621 ggtgtacata ttctgcgtag atgctagacc aaccagcttc ccagggttcg tcgctgtgag
1681 gcgtaaggga catgaattct agggtctcct ttctccttat ttattcttgt ggctacatca
1741 tccctggctg tggatagtgc ttttgtgtag caaatgctcc ctccttaagg ttatagggct
1801 ccctgagttt gggagtgtgg aagtactact taactgtctg tcctgcttgg ctgtcgttat
1861 cgttttctgg tgatgttgtg ctaacaataa gaagtacacg ggtttatttc tgtggcctga
1921 gaaggaaggg acctccacga caggtgggct gggtgcgatc gccggctgtt tggcatgttc
1981 ccaccgggag tgccgggcag gagcatgggg tgcttggttg tttccttcct aataaaataa
2041 acgcgggtcg ccaaaaaaaa aaaaaaaaaa aaaaaaaa
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