LOCUS BC000712 2391 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens kinesin family member C1, mRNA (cDNA clone
IMAGE:3506669).
ACCESSION BC000712
VERSION BC000712.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2391)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2391)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000712.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: i Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 68299768.
FEATURES Location/Qualifiers
source 1..2391
/db_xref="H-InvDB:HIT000029857_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3506669"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2391
/gene="KIFC1"
/gene_synonym="HSET"
/gene_synonym="MKLP2"
/gene_synonym="RAB6-KIFL"
/db_xref="GeneID:3833"
/db_xref="HGNC:HGNC:6389"
/db_xref="MIM:603763"
CDS <1..2180
/gene="KIFC1"
/gene_synonym="HSET"
/gene_synonym="MKLP2"
/gene_synonym="RAB6-KIFL"
/codon_start=3
/product="kinesin family member C1"
/protein_id="AAH00712.2"
/db_xref="GeneID:3833"
/db_xref="HGNC:HGNC:6389"
/db_xref="MIM:603763"
/translation="KSGGCGAGLVAAGAVRVLYPASRAGERTRVPGSPAPSSLPLHSP
GACGTEVDMDPQRSPLLEVKGNIELKRPLIKAPSQLPLSGSRLKRRPDQMEDGLEPEK
KRTRGLGATTKITTSHPRVPSLTTVPQTQGQTTAQKVSKKTGPRCSTAIATGLKNQKP
VPAVPVQKSGTSGVPPMAGGKKPSKRPAWDLKGQLCDLNAELKRCRERTQTLDQENQQ
LQDQLRDAQQQVKALGTERTTLEGHLAKVQAQAEQGQQELKNLRACVLELEERLSTQE
GLVQELQKKQVELQEERRGLMSQLEEKERRLQTSEAALSSSQAEVASLRQETVAQAAL
LTEREERLHGLEMERRRLHNQLQELKGNIRVFCRVRPVLPGEPTPPPGLLLFPSGPGG
PSDPPTRLSLSRSDERRGTLSGAPAPPPRHDFSFDRVFPPGSGQDEVFEEIAMLVQSA
LDGYPVCIFAYGQTGSGKTFTMEGGPGGDPQLEGLIPRALRHLFSVAQELSGQGWTYS
FVASYVEIYNETVRDLLATGTRKGQGGECEIRRAGPGSEELTVTNARYVPVSCEKEVD
ALLHLARQNRAVARTAQNERSSRSHSVFQLQISGEHSSRGLQCGAPLSLVDLAGSERL
DPGLALGPGERERLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGG
SAKMLMFVNISPLEENVSESLNSLRFASKVNQCVIGTAQANRK"
BASE COUNT 559 a 640 c 728 g 464 t
ORIGIN
1 tcaaaagtgg cgggtgtggc gcggggctgg tagcggccgg agccgtgcga gttctctacc
61 ctgcttcgcg agcgggcgag agaacgcgag tcccaggatc cccggcaccc agttctcttc
121 cactgcattc ccccggcgcg tgtgggaccg aggtggacat ggatccgcag aggtcccccc
181 tattggaagt aaaggggaac atagaactga agagacctct gattaaggcc ccttcccagc
241 tgcctctctc aggaagcaga ctcaagagga ggcctgacca gatggaagat ggcctggagc
301 ctgagaagaa acggacaaga ggcctgggtg caacgaccaa aattaccaca tcccacccaa
361 gagttccatc cctcactaca gtgccacaga cacaaggcca gaccacagct caaaaagttt
421 ccaagaagac aggaccccgg tgttccacag ctattgccac agggttgaag aaccagaagc
481 cagttcctgc tgttcctgtc cagaagtctg gcacatcagg tgttcctccc atggcaggag
541 ggaagaaacc cagcaaacgt ccagcctggg acttaaaggg tcagttatgt gacctaaatg
601 cagaactaaa acggtgccgt gagaggactc aaacgttgga ccaagagaac cagcagcttc
661 aggaccagct cagagatgcc cagcagcagg tcaaggccct ggggacagag cgcacaacac
721 tggaggggca tttagccaag gtacaggccc aggctgagca gggccaacag gagctgaaga
781 acttgcgtgc ttgtgtcctg gagctggaag agcggctgag cacgcaggag ggcttggtgc
841 aagagcttca gaaaaaacag gtggaattgc aggaagaacg gaggggactg atgtcccaac
901 tagaggagaa ggagaggagg ctgcagacat cagaagcagc cctgtcaagc agccaagcag
961 aggtggcatc tctgcggcag gagactgtgg cccaggcagc cttactgact gagcgggaag
1021 aacgtcttca tgggctagaa atggagcgcc ggcgactgca caaccagctg caggaactca
1081 agggcaacat ccgtgtattc tgccgggtcc gccctgtcct gccgggggag cccactccac
1141 cccctggcct cctcctgttt ccctctggcc ctggtgggcc ctctgatcct ccaacccgcc
1201 ttagcctctc ccggtctgac gagcggcgtg ggaccctgag tggggcacca gctcccccac
1261 ctcgccatga tttttccttt gaccgggtat tcccaccagg aagtggacag gatgaagtgt
1321 ttgaagagat tgccatgctt gtccagtcag ccctggatgg ctatccagta tgcatctttg
1381 cctatggcca gacaggcagt ggcaagacct tcacaatgga gggtgggcct gggggagacc
1441 cccagttgga ggggctgatc cctcgggccc tgcggcacct cttctctgtg gctcaggagc
1501 tgagtggtca gggctggacc tacagctttg tagcaagcta cgtagagatc tacaatgaga
1561 ctgtccggga cctgctggcc actggaaccc ggaagggtca agggggcgag tgtgagattc
1621 gccgtgcagg gccagggagt gaggagctca ctgtcaccaa tgctcgatat gtccctgtct
1681 cctgtgagaa agaagtggac gccctgcttc atctggcccg ccagaatcgg gctgtggccc
1741 gcacagccca gaatgaacgg tcatcacgca gccacagtgt attccagcta cagatttctg
1801 gggagcactc cagccgaggc ctgcagtgtg gggcccccct cagtcttgtg gacctggccg
1861 ggagtgagcg acttgacccc ggcttagccc tcggccccgg ggagcgggaa cgccttcggg
1921 aaacacaggc cattaacagc agcctgtcca cgctggggct ggttatcatg gccctgagca
1981 acaaggagtc ccacgtgcct taccggaaca gcaaactgac ctacctgctg cagaactctc
2041 tgggtggtag tgctaagatg ctcatgtttg tgaacatttc tccactggaa gagaacgtct
2101 ccgagtccct caactctcta cgctttgcct ccaaggtgaa ccagtgtgtt attggtactg
2161 ctcaggccaa caggaagtga agacggatcc agatctgtgt gtgtgtgtgt gtgtgtgtgt
2221 gtgtgtgtgt gtgtgtgtgt gtgtgtgtcc ctatgtctat gtatcgggtg aggggtggga
2281 gggttgctgg agggtgcttt attgggtgga gggcaccatg tcccagggct atcaaataaa
2341 gaatagtttg gttttttttt taaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//