LOCUS BC000704 1760 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tetraspanin 3, mRNA (cDNA clone MGC:965
IMAGE:3349181), complete cds.
ACCESSION BC000704
VERSION BC000704.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1760)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1760)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000704.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: p Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38787975.
FEATURES Location/Qualifiers
source 1..1760
/db_xref="H-InvDB:HIT000029851"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:965 IMAGE:3349181"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1760
/gene="TSPAN3"
/gene_synonym="TM4-A"
/gene_synonym="TSPAN-3"
/db_xref="GeneID:10099"
/db_xref="HGNC:HGNC:17752"
CDS 179..937
/gene="TSPAN3"
/gene_synonym="TM4-A"
/gene_synonym="TSPAN-3"
/codon_start=1
/product="tetraspanin 3"
/protein_id="AAH00704.1"
/db_xref="GeneID:10099"
/db_xref="HGNC:HGNC:17752"
/translation="MGQCGITSSKTVLVFLNLIFWGAAGILCYVGAYVFITYDDYDHF
FEDVYTLIPAVVIIAVGALLFIIGLIGCCATIRESRCGLAFVIILLLVFVTEVVVVVL
GYVYRAKVENEVDRSIQKVYKTYNGTNPDAASRAIDYVQRQLHCCGIHNYSDWENTDW
FKETKNQSVPLSCCRETASNCNGSLAHPSDLYAEGCEALVVKKLQEIMMHVIWAALAF
AAIQLLGMLCACIVLCRRSRDPAYELLITGGTYA"
BASE COUNT 432 a 380 c 457 g 491 t
ORIGIN
1 gcggctgcgc ggaggagcga ggcgcttgct ggggtcgggg ctgcgcgacg gcgcaggggc
61 tgcggggagc gccgcgcagg ccgtgcagtt cctagcgagg aggcgccgcc gccattgccg
121 ctctctcggt gagcgcagcc ccgctctccg ggccgggcct tcgcgggcca ccggcgccat
181 gggccagtgc ggcatcacct cctccaagac cgtgctggtc tttctcaacc tcatcttctg
241 gggggcagct ggcattttat gctatgtggg agcctatgtc ttcatcactt atgatgacta
301 tgaccacttc tttgaagatg tgtacacgct catccctgct gtagtgatca tagctgtagg
361 agccctgctt ttcatcattg ggctaattgg ctgctgtgcc acaatccggg aaagtcgctg
421 tggacttgcc tttgtcatca tcctgctctt ggtttttgtc acagaagttg ttgtagtggt
481 tttgggatat gtttacagag caaaggtgga aaatgaggtt gatcgcagca ttcagaaagt
541 gtataagacc tacaatggaa ccaaccctga tgctgctagc cgggctattg attatgtaca
601 gagacagctg cattgttgtg gaattcacaa ctactcagac tgggaaaata cagattggtt
661 caaagaaacc aaaaaccaga gtgtccctct tagctgctgc agagagactg ccagcaattg
721 taatggcagc ctggcccacc cttccgacct ctatgctgag gggtgtgagg ctctagttgt
781 gaagaagcta caagaaatca tgatgcatgt gatctgggcc gcactggcat ttgcagctat
841 tcagctgctg ggcatgctgt gtgcttgcat cgtgttgtgc agaaggagta gagatcctgc
901 ttacgagctc ctcatcactg gcggaaccta tgcatagttg acaactcaag cctgagcttt
961 ttggtcttgt tctgatttgg aaggtgaatt gagcaggtct gctgctgttg gcctctggag
1021 ttcatttagt taaagcacat gtacactggt gttggacaga gcagcttggc ttttcatgtg
1081 cccacctact tacctactac ctgcgacttt ctttttcctt gttctagctg actcttcatg
1141 cccctaagat tttaagtacg atggtgaacg ttctaatttc agaaccaatt gcgagtcatg
1201 tagtgtggta gaattaaagg aggacacgag cctgcttctg ttacctccaa gtggtaacag
1261 gactgatgcc gaaatgtcac caggtccttt cagtcttcac agtggagaac tcttggccaa
1321 aggtttttgg ggggaggagg aggaaaccag ctttctggtt aaggttaaca ccagatggtg
1381 cccctcattg gtgtcctttt aaaaaatatt tactgtagtc caataagata gcagctgtac
1441 aaaatgacta aaatagattg taggatcata tggcgtatat cttggttcat cttcaaaatc
1501 agagactgag ctttgaaact agtggttttt aatcaaagtt ggctttatag gaggagtata
1561 atgtatgcac tactgtttta aaagaattag tgtgagtgtg tttttgtatg aatgagccca
1621 ttcatggtaa gtcttaagct tgttggaaat aatgtaccca tgtagactag caaaatagta
1681 tgtagatgtg atctcagttg taaatagaaa aatctaattc aataaactct gtatcagccc
1741 ccaaaaaaaa aaaaaaaaaa
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