LOCUS BC000698 1412 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens keratin 18, mRNA (cDNA clone MGC:1549 IMAGE:3349315),
complete cds.
ACCESSION BC000698
VERSION BC000698.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1412)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1412)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC000698.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: n Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40354194.
FEATURES Location/Qualifiers
source 1..1412
/db_xref="H-InvDB:HIT000029845"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1549 IMAGE:3349315"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1412
/gene="KRT18"
/gene_synonym="CYK18"
/gene_synonym="K18"
/db_xref="GeneID:3875"
/db_xref="HGNC:HGNC:6430"
/db_xref="MIM:148070"
CDS 43..1335
/gene="KRT18"
/gene_synonym="CYK18"
/gene_synonym="K18"
/codon_start=1
/product="keratin 18"
/protein_id="AAH00698.1"
/db_xref="GeneID:3875"
/db_xref="HGNC:HGNC:6430"
/db_xref="MIM:148070"
/translation="MSFTTRSTFSTNYRSLGSVQAPSYGARPVSSAASVYAGAGGSGS
RISVSRSTSFRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDRLASYLDRVRSLE
TENRRLESKIREHLEKKGPQVRDWSHYFKIIEDLRAQIFANTVDNARIVLQIDNARLA
ADDFRVKHETELAMRQSVENDIHGLRKVIDDTNITRLQLETEIEALKEELLFMKKNHE
EEVKGLQAQIASSGLTVEVDAPKSQDLAKIMADIRAQYDELARKNREELDKYWSQQIE
ESTTVVTTQSAEVGAAETTLTELRRTVQSLEIDLDSMRNLKASLENSLREVEARYALQ
MEQLNGILLHLESELAQTRAEGQRQAQEYEALLNIKVKLEAEIATYRRLLEDGEDFNL
GDALDSSNSMQTIQKTTTRRIVDGKVVSETNDTKVLRH"
BASE COUNT 367 a 390 c 421 g 234 t
ORIGIN
1 ccgcaaagcc tgagtcctgt cctttctctc tccccggaca gcatgagctt caccactcgc
61 tccaccttct ccaccaacta ccggtccctg ggctctgtcc aggcgcccag ctacggcgcc
121 cggccggtca gcagcgcggc cagcgtctat gcaggcgctg ggggctctgg ttcccggatc
181 tccgtgtccc gctccaccag cttcaggggc ggcatggggt ccgggggcct ggccaccggg
241 atagccgggg gtctggcagg aatgggaggc atccagaacg agaaggagac catgcaaagc
301 ctgaacgacc gcctggcctc ttacctggac agagtgagga gcctggagac cgagaaccgg
361 aggctggaga gcaaaatccg ggagcacttg gagaagaagg gaccccaggt cagagactgg
421 agccattact tcaagatcat cgaggacctg agggctcaga tcttcgcaaa tactgtggac
481 aatgcccgca tcgttctgca gattgacaat gcccgtcttg ctgctgatga ctttagagtc
541 aagcatgaga cagagctggc catgcgccag tctgtggaga acgacatcca tgggctccgc
601 aaggtcattg atgacaccaa tatcacacga ctgcagctgg agacagagat cgaggctctc
661 aaggaggagc tgctcttcat gaagaagaac cacgaagagg aagtaaaagg cctacaagcc
721 cagattgcca gctctgggtt gaccgtggag gtagatgccc ccaaatctca ggacctcgcc
781 aagatcatgg cagacatccg ggcccaatat gacgagctgg ctcggaagaa ccgagaggag
841 ctagacaagt actggtctca gcagattgag gagagcacca cagtggtcac cacacagtct
901 gctgaggttg gagctgctga gacgacgctc acagagctga gacgtacagt ccagtccttg
961 gagatcgacc tggactccat gagaaatctg aaggccagct tggagaacag cctgagggag
1021 gtggaggccc gctacgccct acagatggag cagctcaacg ggatcctgct gcaccttgag
1081 tcagagctgg cacagacccg ggcagaggga cagcgccagg cccaggagta tgaggccctg
1141 ctgaacatca aggtcaagct ggaggctgag atcgccacct accgccgcct gctggaagat
1201 ggcgaggact ttaatcttgg tgatgccttg gacagcagca actccatgca aaccatccaa
1261 aagaccacca cccgccggat agtggatggc aaagtggtgt ctgagaccaa tgacaccaaa
1321 gttctgaggc attaagccag cagaagcagg gtaccctttg gggagcagga ggccaataaa
1381 aagttcagag ttcaaaaaaa aaaaaaaaaa aa
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