LOCUS BC000664 2049 bp mRNA linear HUM 30-JUN-2008
DEFINITION Homo sapiens lysophosphatidylcholine acyltransferase 3, mRNA (cDNA
clone IMAGE:3349388), partial cds.
ACCESSION BC000664
VERSION BC000664.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2049)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2049)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC000664.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: d Column: 14.
FEATURES Location/Qualifiers
source 1..2049
/db_xref="H-InvDB:HIT000029817"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3349388"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2049
/gene="LPCAT3"
/gene_synonym="C3F"
/gene_synonym="nessy"
/db_xref="GeneID:10162"
/db_xref="HGNC:HGNC:30244"
/db_xref="MIM:611950"
CDS <1..1313
/gene="LPCAT3"
/gene_synonym="C3F"
/gene_synonym="nessy"
/codon_start=3
/product="LPCAT3 protein"
/protein_id="AAH00664.2"
/db_xref="GeneID:10162"
/db_xref="HGNC:HGNC:30244"
/db_xref="MIM:611950"
/translation="YPFALFYRHYLFYKETYLIHLFHTFTGLSIAYFNFGNQLYHSLL
CIVLQFLILRLMGRTITAVLTTFCFQMAYLLAGYYYTATGNYDIKWTMPHCVLTLKLI
GLAVDYFDGGKDQNSLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKL
VQGELIDIPGKIPNSIIPALKRLSLGLFYLVGYTLLSPHITEDYLLTEDYDNHPFWFR
CMYMLIWGKFVLYKYVTCWLVTEGVCILTGLGFNGFEEKGKAKWDACANMKVWLFETN
PRFTGTIASFNINTNAWVARYIFKRLKFLGNKELSQGLSLLFLALWHGLHSGYLVCFQ
MKFLIVIVERQAARLIQESPTLSKLAAITVLQPFYYLVQQTIHWLFMGYSMTAFCLFT
WDKWLKVYKSIYFLGHIFFLSLLFILPYIHKAMVPRKEKLKKME"
BASE COUNT 468 a 573 c 452 g 556 t
ORIGIN
1 gttacccctt tgctttgttt tatcggcatt accttttcta caaggagacc tacctcatcc
61 acctcttcca tacctttaca ggcctctcaa ttgcttattt taactttgga aaccagctct
121 accactccct gctgtgtatt gtgcttcagt tcctcatcct tcgactaatg ggccgcacca
181 tcactgccgt cctcactacc ttttgcttcc agatggccta ccttctggct ggatactatt
241 acactgccac cggcaactac gatatcaagt ggacaatgcc acattgtgtt ctgactttga
301 agctgattgg tttggctgtt gactactttg acggagggaa agatcagaat tccttgtcct
361 ctgagcaaca gaaatatgcc atacgtggtg ttccttccct gctggaagtt gctggtttct
421 cctacttcta tggggccttc ttggtagggc cccagttctc aatgaatcac tacatgaagc
481 tggtgcaggg agagctgatt gacataccag gaaagatacc aaacagcatc attcctgctc
541 tcaagcgcct gagtctgggc cttttctacc tagtgggcta cacactgctc agcccccaca
601 tcacagaaga ctatctcctc actgaagact atgacaacca ccccttctgg ttccgctgca
661 tgtacatgct gatctggggc aagtttgtgc tgtacaaata tgtcacctgt tggctggtca
721 cagaaggagt atgcattttg acgggcctgg gcttcaatgg ctttgaagaa aagggcaagg
781 caaagtggga tgcctgtgcc aacatgaagg tgtggctctt tgaaacaaac ccccgcttca
841 ctggcaccat tgcctcattc aacatcaaca ccaacgcctg ggtggcccgc tacatcttca
901 aacgactcaa gttccttgga aataaagaac tctctcaggg tctctcgttg ctattcctgg
961 ccctctggca cggcctgcac tcaggatacc tggtctgctt ccagatgaaa ttcctcattg
1021 ttattgtgga aagacaggct gccaggctca ttcaagagag ccccaccctg agcaagctgg
1081 ccgccattac tgtcctccag cccttctact atttggtgca acagaccatc cactggctct
1141 tcatgggtta ctccatgact gccttctgcc tcttcacgtg ggacaaatgg cttaaggtgt
1201 ataaatccat ctatttcctt ggccacatct tcttcctgag cctactattc atattgcctt
1261 atattcacaa agcaatggtg ccaaggaaag agaagttaaa gaagatggaa taatccattt
1321 ccctggtggc ctgtgcggga ctggtgcaga aactactcgt ctcccttttc acagcactcc
1381 tttgccccag agcagagaat ggaaaagcca gggaggtgga agatcgatgc ttccagctgt
1441 gcctctgctg ccagccaagt cttcatttgg ggccaaaggg gaaacttttt tttggagaag
1501 gcgtcttgct ttgtcaccca cgctggaatg cagtggcggg atctcagctc accgcaacct
1561 ccacctcctg ggttcaagtg attttcctgc ctcagcctcc caagtagctg ggaatacagg
1621 cacgccacca tgcccagcta atttttgtat tttcagtaga aacgggattt caccacgttg
1681 gccaggctgg tctcgaactc ctgaccgcaa gtgatccacc cgcctccgcc tcccaaagtg
1741 ctgggattac aggcgtgagc caccgtgccc ggcccaaagg ggaaactctt gtgggaggag
1801 cagaggggct cacatctccc ctctgattcc cccatgcaca ttgccttatc tctccccatc
1861 tagccaggaa tctattgtgt ttttcttctg ccaatttact atgattgtgt atgtgccgct
1921 accaccaccc cccccatggg ggggtggaga ggggtgcaag gccctgcctg ctccactttt
1981 tctaccttgg aactgtatta gataaaatca cttctgtttg ttcagttttt caaaaaaaaa
2041 aaaaaaaaa
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