LOCUS BC000636 807 bp mRNA linear HUM 10-MAY-2004
DEFINITION Homo sapiens chromosome 17 open reading frame 39, mRNA (cDNA clone
IMAGE:3343305), partial cds.
ACCESSION BC000636
VERSION BC000636.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 807)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 807)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC000636.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: f Column: 5.
FEATURES Location/Qualifiers
source 1..807
/db_xref="H-InvDB:HIT000029794"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3343305"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..807
/gene="C17orf39"
/gene_synonym="MGC3048"
/db_xref="GeneID:79018"
CDS <1..732
/gene="C17orf39"
/gene_synonym="MGC3048"
/codon_start=1
/product="C17orf39 protein"
/protein_id="AAH00636.2"
/db_xref="GeneID:79018"
/translation="ATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGASAASA
ASLIPPPPINTQQPGVATSLLYSGSKFRGHQKSKGNSYDVEVVLQHVDTGNSYLCGYL
KIKGLTEEYPTLTTFFEGEIISKKHPFLTRKWDADEDVDRKHWGKFLAFYQYAKSFNS
DDFDYEELKNGDYVFMRWKEQFLVPDHTIKDISGASFAGFYYICFQKSAASIEGYYYH
RSSEWYQSLNLTHVPEHSAPIYEFR"
BASE COUNT 223 a 232 c 187 g 165 t
ORIGIN
1 gccaccctcc tcggctcccg cgcggcggcg gcggttcctc tcccactccc cccagccctg
61 gctccggggg accccgcgat gccggtccgc accgagtgtc ccccgccggc cggtgcctcc
121 gctgcctccg cggcctcact catcccgccg ccgcccatca acacccagca gcccggcgtg
181 gccaccagcc tgctctacag cggctccaag ttccgcggcc accagaagag caaggggaac
241 tcgtacgacg tagaggtggt gctgcagcac gtggacacgg gaaactctta cctttgtggg
301 tacttgaaga ttaaaggcct tactgaggag tatccaaccc ttacaacctt cttcgaagga
361 gaaataatca gcaaaaaaca ccctttctta actcgcaagt gggatgcaga tgaagatgtt
421 gatcggaaac actggggcaa gtttctggct ttttatcagt atgcaaaatc atttaactca
481 gatgactttg attatgaaga gctgaagaat ggagactacg tcttcatgag gtggaaggaa
541 cagtttctgg tcccagatca cacgatcaaa gacatcagtg gtgcttcttt tgccgggttc
601 tactacatct gctttcagaa gtcagcagcc tccatagagg gctactacta ccataggagt
661 tcagaatggt atcagtccct caatctaacc catgttcctg aacacagtgc acccatctat
721 gaattccggt gacaacggtt cagaacagca accaaataaa actgaacttg gcaaaaaaaa
781 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//