LOCUS BC000601 1330 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens HIG1 domain family, member 1A, mRNA (cDNA clone
MGC:1248 IMAGE:3346355), complete cds.
ACCESSION BC000601
VERSION BC000601.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1330)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1330)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: e Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7661619.
FEATURES Location/Qualifiers
source 1..1330
/db_xref="H-InvDB:HIT000029766"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1248 IMAGE:3346355"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1330
/gene="HIGD1A"
/gene_synonym="DKFZP564K247"
/gene_synonym="HIG1"
/db_xref="GeneID:25994"
/db_xref="HGNC:HGNC:29527"
CDS 61..342
/gene="HIGD1A"
/gene_synonym="DKFZP564K247"
/gene_synonym="HIG1"
/codon_start=1
/product="HIG1 domain family, member 1A"
/protein_id="AAH00601.1"
/db_xref="GeneID:25994"
/db_xref="HGNC:HGNC:29527"
/translation="MSTDTGVSLPSYEEDQGSKLIRKAKEAPFVPVGIAGFAAIVAYG
LYKLKSRGNTKMSIHLIHMRVAAQGFVVGAMTVGMGYSMYREFWAKPKP"
BASE COUNT 415 a 210 c 267 g 438 t
ORIGIN
1 ggaagccggt tggggtgtga gaggttttct cgctctaggg agattcttca agcaatcact
61 atgtcaacag acacaggtgt ttcccttcct tcatatgagg aagatcaggg atcaaaactc
121 attcgaaaag ctaaagaggc accattcgta cccgttggaa tagcgggttt tgcagcaatt
181 gttgcatatg gattatataa actgaagagc aggggaaata ctaaaatgtc cattcatctg
241 atccacatgc gtgtggcagc ccaaggcttt gttgtaggag caatgactgt tggtatgggc
301 tattccatgt atcgggaatt ctgggcaaaa cctaagcctt agaagaagag atgctgtctt
361 ggtcttgttg gaggagcttg ctttagttag atgtcttatt attaaagtta cctattattg
421 ttggaaataa actaatttgt atgggtttag atggtaacat ggcattttga atattggctt
481 cctttcttgc aggcttgatt tgcttggtga ccgaattact agtgactagt ttactaacta
541 ggtcattcaa ggaagtcaag ttaacttaaa catgtcacct aaatgcactt gatggtgttg
601 aaatgtccac cttcttaaat ttttaagatg aacttagttc taaagaagat aacaggccaa
661 tcctgaaggt actccctgtt tgctgcagaa tgtcagatat tttggatgtt gcataagagt
721 cctatttgcc ccagttaatt caacttttgt ctgcctgttt tgtggactgg ctggctctgt
781 tagaactctg tccaaaaagt gcatggaata taacttgtaa agcttcccac aattgacaat
841 atatatgcat gtgtttaaac caaatccaga aagcttaaac aatagagctg cataatagta
901 tttattaaag aatcacaact gtaaacatga gaataactta aggattctag tttagttttt
961 tgtaattgca aattatattt ttgctgctga tatattagaa taatttttaa atgtcatctt
1021 gaaatagaaa tatgtatttt aagcactcac gcaaaggtaa atgcacacgt tttaaatgtg
1081 tgtgttgcta attttttcca taagaattgt aaacattgaa ctgaacaaat tacctataat
1141 ggatttggtt aatgacttat gagcaagctg gtttggccag acagtatacc caaactttta
1201 tataatatac agaaggctat cacacttgtg aaattctctt gtctaatctg aatttgcatt
1261 ccatggtgtt aacatggtat atgtattgtt attaaagtaa gtgacccatg tcaaaaaaaa
1321 aaaaaaaaaa
//