LOCUS BC000594 3413 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lysyl oxidase-like 2, mRNA (cDNA clone MGC:1709
IMAGE:3347512), complete cds.
ACCESSION BC000594
VERSION BC000594.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3413)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3413)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000594.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: a Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 67782347.
FEATURES Location/Qualifiers
source 1..3413
/db_xref="H-InvDB:HIT000029761"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1709 IMAGE:3347512"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3413
/gene="LOXL2"
/gene_synonym="LOR2"
/gene_synonym="WS9-14"
/db_xref="GeneID:4017"
/db_xref="HGNC:HGNC:6666"
/db_xref="MIM:606663"
CDS 210..2534
/gene="LOXL2"
/gene_synonym="LOR2"
/gene_synonym="WS9-14"
/codon_start=1
/product="lysyl oxidase-like 2"
/protein_id="AAH00594.1"
/db_xref="GeneID:4017"
/db_xref="HGNC:HGNC:6666"
/db_xref="MIM:606663"
/translation="MERPLCSHLCSCLAMLALLSPLSLAQYDSWPHYPEYFQQPAPEY
HQPQAPANVAKIQLRLAGQKRKHSEGRVEVYYDGQWGTVCDDDFSIHAAHVVCRELGY
VEAKSWTASSSYGKGEGPIWLDNLHCTGNEATLAACTSNGWGVTDCKHTEDVGVVCSD
KRIPGFKFDNSLINQIENLNIQVEDIRIRAILSTYRKRTPVMEGYVEVKEGKTWKQIC
DKHWTAKNSRVVCGMFGFPGERTYNTKVYKMFASRRKQRYWPFSMDCTGTEAHISSCK
LGPQVSLDPMKNVTCENGLPAVVSCVPGQVFSPDGPSRFRKAYKPEQPLVRLRGGAYI
GEGRVEVLKNGEWGTVCDDKWDLVSASVVCRELGFGSAKEAVTGSRLGQGIGPIHLNE
IQCTGNEKSIIDCKFNAESQGCNHEEDAGVRCNTPAMGLQKKLRLNGGRNPYEGRVEV
LVERNGSLVWGMVCGQNWGIVEAMVVCRQLGLGFASNAFQETWYWHGDVNSNKVVMSG
VKCSGTELSLAHCRHDGEDVACPQGGVQYGAGVACSETAPDLVLNAEMVQQTTYLEDR
PMFLLQCAMEENCLSASAAQTDPTTGYRRLLRFSSQIHNNGQSDFRPKNGRHAWIWHD
CHRHYHSMEVFTHYDLLNLNGTKVAEGHKASFCLEDTECEGDIQKNYECANFGDQGIT
MGCWDMYRHDIDCQWVDITDVPPGDYLFQVVINPNFEVAESDYSNNIMKCRSRYDGHR
IWMYNCHIGGSFSEETEKKFEHFSGLLNNQLSPQ"
BASE COUNT 788 a 996 c 974 g 655 t
ORIGIN
1 ctccagccat cggagaccag agccgccccc tctgctcgag aaaggggctc agcggcggcg
61 gaagcggagg gggaccaccg tggagagcgc ggtcccagcc cggccactgc ggatccctga
121 aaccaaaaag ctcctgctgc ttctgtaccc cgcctgtccc tcccagctgc gcagggcccc
181 ttcgtgggat catcagcccg aagacaggga tggagaggcc tctgtgctcc cacctctgca
241 gctgcctggc tatgctggcc ctcctgtccc ccctgagcct ggcacagtat gacagctggc
301 cccattaccc cgagtacttc cagcaaccgg ctcctgagta tcaccagccc caggcccccg
361 ccaacgtggc caagattcag ctgcgcctgg ctgggcagaa gaggaagcac agcgagggcc
421 gggtggaggt gtactatgat ggccagtggg gcaccgtgtg cgatgacgac ttctccatcc
481 acgctgccca cgtcgtctgc cgggagctgg gctacgtgga ggccaagtcc tggactgcca
541 gctcctccta cggcaaggga gaagggccca tctggttaga caatctccac tgtactggca
601 acgaggcgac ccttgcagca tgcacctcca atggctgggg cgtcactgac tgcaagcaca
661 cggaggatgt cggtgtggtg tgcagcgaca aaaggattcc tgggttcaaa tttgacaatt
721 cgttgatcaa ccagatagag aacctgaata tccaggtgga ggacattcgg attcgagcca
781 tcctctcaac ctaccgcaag cgcaccccag tgatggaggg ctacgtggag gtgaaggagg
841 gcaagacctg gaagcagatc tgtgacaagc actggacggc caagaattcc cgcgtggtct
901 gcggcatgtt tggcttccct ggggagagga catacaatac caaagtgtac aaaatgtttg
961 cctcacggag gaagcagcgc tactggccat tctccatgga ctgcaccggc acagaggccc
1021 acatctccag ctgcaagctg ggcccccagg tgtcactgga ccccatgaag aatgtcacct
1081 gcgagaatgg gctaccggcc gtggtgagtt gtgtgcctgg gcaggtcttc agccctgacg
1141 gaccctcgag attccggaaa gcgtacaagc cagagcaacc cctggtgcga ctgagaggcg
1201 gtgcctacat cggggagggc cgcgtggagg tgctcaaaaa tggagagtgg gggaccgtct
1261 gcgacgacaa gtgggacctg gtgtcggcca gtgtggtctg cagagagctg ggctttggga
1321 gtgccaaaga ggcagtcact ggctcccgac tggggcaagg gatcggaccc atccacctca
1381 acgagatcca gtgcacaggc aatgagaagt ccattataga ctgcaagttc aatgccgagt
1441 ctcagggctg caaccacgag gaggatgctg gtgtgagatg caacacccct gccatgggct
1501 tgcagaagaa gctgcgcctg aacggcggcc gcaatcccta cgagggccga gtggaggtgc
1561 tggtggagag aaacgggtcc cttgtgtggg ggatggtgtg tggccaaaac tggggcatcg
1621 tggaggccat ggtggtctgc cgccagctgg gcctgggatt cgccagcaac gccttccagg
1681 agacctggta ttggcacgga gatgtcaaca gcaacaaagt ggtcatgagt ggagtgaagt
1741 gctcgggaac ggagctgtcc ctggcgcact gccgccacga cggggaggac gtggcctgcc
1801 cccagggcgg agtgcagtac ggggccggag ttgcctgctc agaaaccgcc cctgacctgg
1861 tcctcaatgc ggagatggtg cagcagacca cctacctgga ggaccggccc atgttcctgc
1921 tgcagtgtgc catggaggag aactgcctct cggcctcagc cgcgcagacc gaccccacca
1981 cgggctaccg ccggctcctg cgcttctcct cccagatcca caacaatggc cagtccgact
2041 tccggcccaa gaacggccgc cacgcgtgga tctggcacga ctgtcacagg cactaccaca
2101 gcatggaggt gttcacccac tatgacctgc tgaacctcaa tggcaccaag gtggcagagg
2161 gccacaaggc cagcttctgc ttggaggaca cagaatgtga aggagacatc cagaagaatt
2221 acgagtgtgc caacttcggc gatcagggca tcaccatggg ctgctgggac atgtaccgcc
2281 atgacatcga ctgccagtgg gttgacatca ctgacgtgcc ccctggagac tacctgttcc
2341 aggttgttat taaccccaac ttcgaggttg cagaatccga ttactccaac aacatcatga
2401 aatgcaggag ccgctatgac ggccaccgca tctggatgta caactgccac ataggtggtt
2461 ccttcagcga agagacggaa aaaaagtttg agcacttcag cgggctctta aacaaccagc
2521 tgtccccgca gtaaagaagc ctgcgtggtc aactcctgtc ttcaggccac accacatctt
2581 ccatgggact tccccccaac aactgagtct gaacgaatgc cacgtgccct cacccagccc
2641 ggcccccacc ctgtccagac ccctacagct gtgtctaagc tcaggaggaa agggaccctc
2701 ccatcattca tggggggctg ctacctgacc cttggggcct gagaaggcct tgggggggtg
2761 gggtttgtcc acagagctgc tggagcagca ccaagagcca gtcttgaccg ggatgaggcc
2821 cacagacagg ttgtcatcag cttgtcccat tcaagccacc gagctcacca cagacacagt
2881 ggagccgcgc tcttctccag tgacacgtgg acaaatgcgg gctcatcagc ccccccagag
2941 agggtcaggc cgaaccccat ttctcctcct cttaggtcat tttcagcaaa cttgaatatc
3001 tagacctctc ttccaatgaa accctccagt ctattatagt cacatagata atggtgccac
3061 gtgttttctg atttggtgag ctcagacttg gtgcttccct ctccacaacc cccacccctt
3121 gtttttcaag atactattat tatattttca cagacttttg aagcacaaat ttattggcat
3181 ttaatattgg acatctgggc ccttggaagt acaaatctaa ggaaaaacca acccactgtg
3241 taagtgactc atcttcctgt tgttccaatt ctgtgggttt ttgattcaac ggtgctataa
3301 ccagggtcct gggtgacagg gcgctcactg agcaccatgt gtcatcacag acacttacac
3361 atacttgaaa cttggaataa aagaaagatt tatgaaaaaa aaaaaaaaaa aaa
//