LOCUS BC000559 3000 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens ATP-binding cassette, sub-family B (MDR/TAP), member
6, mRNA (cDNA clone MGC:3021 IMAGE:3162881), complete cds.
ACCESSION BC000559
VERSION BC000559.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3000)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3000)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000559.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: g Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9955962.
FEATURES Location/Qualifiers
source 1..3000
/db_xref="H-InvDB:HIT000029735"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3021 IMAGE:3162881"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3000
/gene="ABCB6"
/gene_synonym="ABC"
/gene_synonym="ABC14"
/gene_synonym="EST45597"
/gene_synonym="MTABC3"
/gene_synonym="PRP"
/gene_synonym="umat"
/db_xref="GeneID:10058"
/db_xref="HGNC:HGNC:47"
/db_xref="MIM:605452"
CDS 269..2797
/gene="ABCB6"
/gene_synonym="ABC"
/gene_synonym="ABC14"
/gene_synonym="EST45597"
/gene_synonym="MTABC3"
/gene_synonym="PRP"
/gene_synonym="umat"
/codon_start=1
/product="ATP-binding cassette, sub-family B (MDR/TAP),
member 6"
/protein_id="AAH00559.1"
/db_xref="GeneID:10058"
/db_xref="HGNC:HGNC:47"
/db_xref="MIM:605452"
/translation="MVTVGNYCEAEGPVGPAWMQDGLSPCFFFTLVPSTRMALGTLAL
VLALPCRRRERPAGADSLSWGAGPRISPYVLQLLLATLQAALPLAGLAGRVGTARGAP
LPSYLLLASVLESLAGACGLWLLVVERSQARQRLAMGIWIKFRHSPGLLLLWTVAFAA
ENLALVSWNSPQWWWARADLGQQVQFSLWVLRYVVSGGLFVLGLWAPGLRPQSYTLQV
HEEDQDVERSQVRSAAQQSTWRDFGRKLRLLSGYLWPRGSPALQLVVLICLGLMGLER
ALNVLVPIFYRNIVNLLTEKAPWNSLAWTVTSYVFLKFLQGGGTGSTGFVSNLRTFLW
IRVQQFTSRRVELLIFSHLHELSLRWHLGRRTGEVLRIADRGTSSVTGLLSYLVFNVI
PTLADIIIGIIYFSMFFNAWFGLIVFLCMSLYLTLTIVVTEWRTKFRRAMNTQENATR
ARAVDSLLNFETVKYYNAESYEVERYREAIIKYQGLEWKSSASLVLLNQTQNLVIGLG
LLAGSLLCAYFVTEQKLQVGDYVLFGTYIIQLYMPLNWFGTYYRMIQTNFIDMENMFD
LLKEETEVKDLPGAGPLRFQKGRIEFENVHFSYADGRETLQDVSFTVMPGQTLALVGP
SGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDTIAD
NIRYGRVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIART
ILKAPGIILLDEATSALDTSNERAIQASLAKVCANRTTIVVAHRLSTVVNADQILVIK
DGCIVERGRHEALLSRGGVYADMWQLQQGQEETSEDTKPQTMER"
BASE COUNT 588 a 830 c 915 g 667 t
ORIGIN
1 gttggcagaa gggtcccggg cccagagcca gcggggccgt gctgagacgg cgtacgtgcc
61 ctgcgtgagt gcgtggcggc ggcgcgtgcg ctaggggagt gggcggtgag gcctggtcca
121 cgtgcgtccc ttcccgggac ccccgcagct tggcgcccag cggctacgtg agccaaggca
181 cccggatgtc cgcgcccctc tccgagtgac aagtcccggc ctccggtccc gcagtgcccg
241 cagcctcggc cggcgtccac gcattgccat ggtgactgtg ggcaactact gcgaggccga
301 agggcccgtg ggtccggcct ggatgcagga tggcctgagt ccctgcttct tcttcacgct
361 cgtgccctcg acgcggatgg ctctagggac tctggccttg gtgctggctc ttccctgcag
421 acgccgggag cggcccgctg gtgctgattc gctgtcttgg ggggccggcc ctcgcatctc
481 tccctacgtg ctgcagctgc ttctggccac acttcaggcg gcgctgcccc tggccggcct
541 ggctggccgg gtgggcactg cccggggggc cccactgcca agctatctac ttctggcctc
601 cgtgctggag agtctggccg gcgcctgtgg cctgtggctg cttgtcgtgg agcggagcca
661 ggcacggcag cgtctggcaa tgggcatctg gatcaagttc aggcacagcc ctggtctcct
721 gctcctctgg actgtggcgt ttgcagctga gaacttggcc ctggtgtctt ggaacagccc
781 acagtggtgg tgggcaaggg cagacttggg ccagcaggtt cagtttagcc tgtgggtgct
841 gcggtatgtg gtctctggag ggctgtttgt cctgggtctc tgggcccctg gacttcgtcc
901 ccagtcctat acattgcagg ttcatgaaga ggaccaagat gtggaaagga gccaggttcg
961 gtcagcagcc caacagtcta cctggcgaga ttttggcagg aagctccgcc tcctgagtgg
1021 ctacctgtgg cctcgaggga gtccagctct gcagctggtg gtgctcatct gcctggggct
1081 catgggtttg gaacgggcac tcaatgtgtt ggtgcctata ttctatagga acattgtgaa
1141 cttgctgact gagaaggcac cttggaactc tctggcctgg actgttacca gttacgtctt
1201 cctcaagttc ctccaggggg gtggcactgg cagtacaggc ttcgtgagca acctgcgcac
1261 cttcctgtgg atccgggtgc agcagttcac gtctcggcgg gtggagctgc tcatcttctc
1321 ccacctgcac gagctctcac tgcgctggca cctggggcgc cgcacagggg aggtgctgcg
1381 gatcgcggat cggggcacat ccagtgtcac agggctgctc agctacctgg tgttcaatgt
1441 catccccacg ctggccgaca tcatcattgg catcatctac ttcagcatgt tcttcaacgc
1501 ctggtttggc ctcattgtgt tcctgtgcat gagtctttac ctcaccctga ccattgtggt
1561 cactgagtgg agaaccaagt ttcgtcgtgc tatgaacaca caggagaacg ctacccgggc
1621 acgagcagtg gactctctgc taaacttcga gacggtgaag tattacaacg ccgagagtta
1681 cgaagtggaa cgctatcgag aggccatcat caaatatcag ggtttggagt ggaagtcgag
1741 cgcttcactg gttttactaa atcagaccca gaacctggta attgggctcg ggctcctcgc
1801 cggctccctg ctttgcgcat actttgtcac tgagcagaag ctacaggttg gggactatgt
1861 gctctttggc acctacatta tccagctgta catgcccctc aattggtttg gcacctacta
1921 caggatgatc cagaccaact tcattgacat ggagaacatg tttgacttgc tgaaagagga
1981 gacagaagtg aaggaccttc ctggagcagg gccccttcgc tttcagaagg gccgtattga
2041 gtttgagaac gtgcacttca gctatgccga tgggcgggag actctgcagg acgtgtcttt
2101 cactgtgatg cctggacaga cacttgccct ggtgggccca tctggggcag ggaagagcac
2161 aattttgcgc ctgctgtttc gcttctacga catcagctct ggctgcatcc gaatagatgg
2221 gcaggacatt tcacaggtga cccaggcctc tctccggtct cacattggag ttgtgcccca
2281 agacactgtc ctctttaatg acaccatcgc cgacaatatc cgttacggcc gtgtcacagc
2341 tgggaatgat gaggtggagg ctgctgctca ggctgcaggc atccatgatg ccattatggc
2401 tttccctgaa gggtacagga cacaggtggg cgagcgggga ctgaagctga gcggcgggga
2461 gaagcagcgc gtcgccattg cccgcaccat cctcaaggct ccgggcatca ttctgctgga
2521 tgaggcaacg tcagcgctgg atacatctaa tgagagggcc atccaggctt ctctggccaa
2581 agtctgtgcc aaccgcacca ccatcgtagt ggcacacagg ctctcaactg tggtcaatgc
2641 tgaccagatc ctcgtcatca aggatggctg catcgtggag aggggacgac acgaggctct
2701 gttgtcccga ggtggggtgt atgctgacat gtggcagctg cagcagggac aggaagaaac
2761 ctctgaagac actaagcctc agaccatgga acggtgacaa aagtttggcc acttccctct
2821 caaagactaa cccagaaggg aataagatgt gtctcctttc cctggcttat ttcatcctgg
2881 tcttggggta tggtgctagc tatggtaagg gaaagggacc tttccgaaaa acatcttttg
2941 gggaaataaa aatgtggact gtgaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//