LOCUS BC000544 1672 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens potassium inwardly-rectifying channel, subfamily J,
member 8, mRNA (cDNA clone MGC:1462 IMAGE:3161776), complete cds.
ACCESSION BC000544
VERSION BC000544.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1672)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1672)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000544.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: c Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 25121968.
FEATURES Location/Qualifiers
source 1..1672
/db_xref="H-InvDB:HIT000029723"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1462 IMAGE:3161776"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1672
/gene="KCNJ8"
/gene_synonym="KIR6.1"
/gene_synonym="uKATP-1"
/db_xref="GeneID:3764"
/db_xref="HGNC:HGNC:6269"
/db_xref="MIM:600935"
CDS 207..1481
/gene="KCNJ8"
/gene_synonym="KIR6.1"
/gene_synonym="uKATP-1"
/codon_start=1
/product="potassium inwardly-rectifying channel, subfamily
J, member 8"
/protein_id="AAH00544.1"
/db_xref="GeneID:3764"
/db_xref="HGNC:HGNC:6269"
/db_xref="MIM:600935"
/translation="MLARKSIIPEEYVLARIAAENLRKPRIRDRLPKARFIAKSGACN
LAHKNIREQGRFLQDIFTTLVDLKWRHTLVIFTMSFLCSWLLFAIMWWLVAFAHGDIY
AYMEKSGMEKSGLESTVCVTNVRSFTSAFLFSIEVQVTIGFGGRMMTEECPLAITVLI
LQNIVGLIINAVMLGCIFMKTAQAHRRAETLIFSRHAVIAVRNGKLCFMFRVGDLRKS
MIISASVRIQVVKKTTTPEGEVVPIHQLDIPVDNPIESNNIFLVAPLIICHVIDKRSP
LYDISATDLANQDLEVIVILEGVVETTGITTQARTSYIAEEIQWGHRFVSIVTEEEGV
YSVDYSKFGNTVKVAAPRCSARELDEKPSILIQTLQKSELSHQNSLRKRNSMRRNNSM
RRNNSIRRNNSSLMVPKVQFMTPEGNQNTSES"
BASE COUNT 440 a 416 c 425 g 391 t
ORIGIN
1 cacgcagccc ccaatttgtc cctccggcct gggcggcccc tggtcccgcg cgccagcatg
61 ggagagcgag ggacctgccc gcggcccgcc ggcgtgtgca aggaggtcca gccgccgcgc
121 ccgctacccg gagtctgagg acgggtgtcc agggacggag aggcaggtga gagggaggtg
181 gctaagctgg ctatggtgac aggacgatgt tggccagaaa gagtatcatc ccggaggagt
241 atgtgctggc gcgcatcgcc gcagagaacc tgcgcaagcc gcgcatccga gaccgcctcc
301 ccaaagcccg cttcatcgcc aagagcgggg cctgcaacct ggcgcataag aacatccgtg
361 agcaaggacg ctttctacag gacatcttca ccaccttggt ggacctgaaa tggcgccaca
421 cgctggtcat ctttaccatg tccttcctct gcagctggct gctcttcgct atcatgtggt
481 ggctggtggc ctttgcccat ggggacatct atgcttacat ggagaaaagt ggaatggaga
541 aaagtggttt ggagtccact gtgtgtgtga ctaatgtcag gtctttcact tctgcttttc
601 tcttctccat tgaagttcaa gttaccattg ggtttggagg gaggatgatg acagaggaat
661 gccctttggc catcacggtt ttgattctcc agaatattgt gggtttgatc atcaatgcag
721 tcatgttagg ctgcattttc atgaaaacag ctcaggctca cagaagggca gaaactttga
781 ttttcagccg ccatgctgtg attgccgtcc gaaatggcaa gctgtgcttc atgttccgag
841 tgggtgacct gaggaaaagc atgatcatta gtgcctctgt gcgcatccag gtggtcaaga
901 aaacaactac acctgaaggg gaggtggttc ctattcacca actggacatt cctgttgata
961 acccaatcga gagcaataac atttttctgg tggccccttt gatcatctgc cacgtgattg
1021 acaagcgcag tcccctgtat gacatctcag caactgacct ggccaaccaa gacttggagg
1081 tcatagttat tctggaagga gtggttgaaa ctactggcat caccacacaa gcacgaacct
1141 cctacattgc tgaggagatc caatggggcc accgctttgt gtccattgtg actgaggaag
1201 aaggagtgta ttctgtggat tactccaaat ttggcaacac tgttaaagta gctgctccac
1261 ggtgcagtgc ccgagagctg gatgagaaac cttccatcct tattcagacc ctccaaaaga
1321 gtgaactgtc tcatcaaaat tctctgagga agcgcaactc catgagaaga aacaattcca
1381 tgaggaggaa caattctatc cgaaggaaca attcttccct catggtacca aaggtgcaat
1441 ttatgactcc agaaggaaat caaaacacat cggaatcatg acagcaagat aaccccaaga
1501 cagtctttta tcaagttttg acggtttatg ctgggcactg ccagactgaa ccagagctgg
1561 aacacaataa tgtgtccttc tacattttat tacactaaat gatattcata ttcaagcaac
1621 agcactttct gtagtaataa aaattaacac accaaaaaaa aaaaaaaaaa aa
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