LOCUS BC000541 2416 bp mRNA linear HUM 06-MAR-2007
DEFINITION Homo sapiens threonyl-tRNA synthetase 2, mitochondrial (putative),
mRNA (cDNA clone MGC:3031 IMAGE:3163506), complete cds.
ACCESSION BC000541
VERSION BC000541.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2416)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2416)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC000541.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: a Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39725684.
FEATURES Location/Qualifiers
source 1..2416
/db_xref="H-InvDB:HIT000029720"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3031 IMAGE:3163506"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2416
/gene="TARS2"
/db_xref="GeneID:80222"
/db_xref="HGNC:HGNC:30740"
CDS 35..2191
/gene="TARS2"
/codon_start=1
/product="threonyl-tRNA synthetase 2, mitochondrial
(putative)"
/protein_id="AAH00541.1"
/db_xref="GeneID:80222"
/db_xref="HGNC:HGNC:30740"
/translation="MALYQRWRCLRLQGLQACRLHTAVVSTPPRWLAERLGLFEELWA
AQVKRLASMAQKEPRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNG
EPYDLERPLETDSDLRFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAVLCRGPSTEYG
FYHDFFLGKERTIRGSELPVLERICQELTAAARPFRRLEASRDQLRQLFKDNPFKLHL
IEEKVTGPTATVYGCGTLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPETLQRV
SGISFPTTELLRVWEAWREEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNA
LVAFIRAEYAHRGFSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSD
DSTRHITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTR
LRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLALSTRPSGFLGDPCLW
DQAEQVLKQALKEFGEPWDLNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLR
FDLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSE
QEEYAKEAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVN
IRTRDNRRLGEWDLPEAVQRLVELQNTRVPNAEEIF"
BASE COUNT 565 a 631 c 695 g 525 t
ORIGIN
1 ctgtttgagg atgtaggcac tggtgtgaag gaacatggcc ctgtatcaga ggtggcggtg
61 tctccggctc caaggtttac aggcttgcag gctacacacg gcagttgtgt cgacccctcc
121 acgctggttg gcagagcggc ttggcctttt tgaggagctg tgggctgctc aggtaaagag
181 attagcaagc atggcacaga aggaaccccg gactattaag atatcacttc ctggaggcca
241 gaaaattgat gctgtggcat ggaacacaac cccctaccaa ctagcccggc agatcagttc
301 aacactggca gatactgcag tggctgctca agtgaatgga gaaccttatg atctggagcg
361 gcccttggag acagattctg acctcagatt tctgacattc gattccccag aggggaaagc
421 agtgttctgg cactccagca cccatgtcct gggggcagca gctgaacaat tcctaggtgc
481 tgttctctgc agaggtccaa gtacagaata tggcttttac catgatttct tcctgggaaa
541 ggagaggaca atccggggct cagagctgcc tgttttggag cggatttgcc aggaacttac
601 agctgctgct cgacccttcc ggaggctaga ggcttcacgg gatcagcttc gccagttgtt
661 caaggataac ccctttaagc ttcacttgat tgaggagaaa gtgacaggtc caacagcaac
721 agtatatggg tgtggcacat tggttgacct ttgccagggc ccccaccttc ggcatactgg
781 acagattgga ggactgaagc tgctatcgaa ctcatcatcc ttatggaggt cttcaggggc
841 cccagagaca ctgcagagag tgtcagggat ttccttcccc acaacagaat tgctgagggt
901 ctgggaagca tggagggagg aagcagaatt gcgggaccac cggcgcattg ggaaggaaca
961 ggagctcttc ttcttccatg aactgagccc tgggagctgc ttcttcctgc cacgagggac
1021 aagggtgtat aatgcactag tggcgtttat cagggctgag tatgcccatc gtggtttctc
1081 cgaggtgaaa actcccacac tgttttctac gaagctctgg gaacagtcag ggcactggga
1141 gcattatcag gaagacatgt ttgccgtgca gcccccaggc tctgacaggc ctcccagctc
1201 ccagagtgac gattctacca ggcatatcac agatacactc gccctcaagc ctatgaactg
1261 ccctgcacac tgcctgatgt tcgcccaccg gcccagatcc tggcgggaac tgcccctgcg
1321 actagctgac tttggggctc tacaccgggc cgaagcctct ggtggtctgg ggggactgac
1381 ccgactgcgg tgcttccagc aggatgacgc tcacatcttc tgtacaacag atcagctgga
1441 agcagagatc caaagctgtc ttgatttcct ccgttccgtc tatgccgttc ttggcttctc
1501 cttccgcctg gcactgtcca cccggccatc tggcttcctg ggggaccctt gcctttggga
1561 ccaggccgaa caggtcctta aacaggccct gaaggaattt ggagaaccct gggacctcaa
1621 ctctggagat ggtgccttct atggacctaa gattgacgtg cacctccacg atgccctggg
1681 ccggccacat cagtgtggga caattcagct tgacttccaa ctgcccctga gatttgacct
1741 ccagtataag gggcaggcgg gtgccctgga gcgtccagtc ctcattcacc gagcagtgct
1801 cggttctgtg gaaagactgt tgggagtgct ggcagaaagc tgcgggggga aatggccact
1861 gtggctgtcc ccgttccagg tggtggtcat ccctgtgggg agtgagcaag aggaatacgc
1921 caaagaggca cagcagagcc tgcgggctgc aggactggtc agtgacctgg atgcagactc
1981 tggactgacc ctcagccgga gaatccgccg ggcccagctt gcccactaca attttcagtt
2041 tgtggttggc cagaaagagc aaagtaagag aacagtgaac attcggactc gagataatcg
2101 tcgccttggg gagtgggact tgcctgaggc tgtgcagcga ctggtggagc tacagaacac
2161 gagggtccca aatgccgaag aaattttctg agcctttgta catagatgag gcaaaaacct
2221 gcgagtgcca tcagcctccc tcacatggga gaccccaacc cagctgacaa tgtggagccc
2281 ccagaacttc agaactgtgt ggaggcacat gtctgctctc ctgaaaagag acttggtttg
2341 gggaccccac aaaaggaggg aagctgtagc tgtttggatg tgaggagaat gaaactacaa
2401 aaaaaaaaaa aaaaaa
//