LOCUS BC000448 2626 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens THUMP domain containing 1, mRNA (cDNA clone MGC:8446
IMAGE:2821354), complete cds.
ACCESSION BC000448
VERSION BC000448.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2626)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2626)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000448.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: f Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62865619.
FEATURES Location/Qualifiers
source 1..2626
/db_xref="H-InvDB:HIT000029633"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8446 IMAGE:2821354"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2626
/gene="THUMPD1"
/db_xref="GeneID:55623"
/db_xref="HGNC:HGNC:23807"
CDS 58..1119
/gene="THUMPD1"
/codon_start=1
/product="THUMP domain containing 1"
/protein_id="AAH00448.1"
/db_xref="GeneID:55623"
/db_xref="HGNC:HGNC:23807"
/translation="MAAPAQQTTQPGGGKRKGKAQYVLAKRARRCDAGGPRQLEPGLQ
GILITCNMNERKCVEEAYSLLNEYGDDMYGPEKFTDKDQQPSGSEGEDDDAEAALKKE
VGDIKASTEMRLRRFQSVESGANNVVFIRTLGIEPEKLVHHILQDMYKTKKKKTRVIL
RMLPISGTCKAFLEDMKKYAETFLEPWFKAPNKGTFQIVYKSRNNSHVNREEVIRELA
GIVCTLNSENKVDLTNPQYTVVVEIIKAVCCLSVVKDYMLFRKYNLQEVVKSPKDPSQ
LNSKQGNGKEAKLESADKSDQNNTAEGKNNQQVPENTEELGQTKPTSNPQVVNEGGAK
PELASQATEGSKSNENDFS"
BASE COUNT 840 a 481 c 611 g 694 t
ORIGIN
1 cgaggacgcc aacagcagcg gagaaacgtt tctctttcct ctcagtttgc gcacaccatg
61 gcggcccctg cccagcagac tactcagcct ggcggcggga agcgcaaagg caaggctcag
121 tatgtgctgg ccaagcgcgc tcggcgctgc gacgctggcg ggccccgtca gctagagccc
181 gggctacagg gcatcctcat cacctgcaat atgaacgagc gcaagtgcgt ggaggaggcc
241 tacagcctcc tcaacgaata cggcgacgac atgtatgggc cagaaaagtt tacagacaag
301 gatcagcagc cctctggaag tgagggagag gatgatgatg cggaggctgc cttgaagaaa
361 gaagttggtg acattaaggc atctacagag atgaggttaa gaagattcca gtcagtggaa
421 agtggagcaa ataacgttgt cttcatcagg acacttggga tagagcctga gaaattggtg
481 catcatattc tccaggatat gtacaaaacc aagaaaaaga agactcgagt tattttgcga
541 atgttaccca tctcaggcac atgcaaggct tttttagaag atatgaaaaa atatgcagaa
601 acatttttgg aaccctggtt taaagctcca aacaaaggga catttcagat tgtgtacaaa
661 tctcgaaata acagtcatgt gaatagagaa gaagttatca gagaattggc aggaatagtg
721 tgcaccctca attcagaaaa taaagtggat ctcaccaatc cacagtacac agtggtagta
781 gaaatcatca aagctgtctg ttgcctgagt gttgtgaaag attacatgtt gtttagaaaa
841 tacaatctcc aggaggtggt gaagagccct aaggatccgt cacagcttaa ctcaaagcag
901 ggaaatggga aagaagctaa actggaatct gcggacaaat cagaccaaaa caacacagca
961 gaaggaaaaa ataaccagca ggtaccagag aatactgagg agctggggca gacaaaacca
1021 acgtctaatc cacaggtggt aaatgaggga ggagccaaac ctgaacttgc aagtcaagcc
1081 acagaaggat ccaagtcaaa tgaaaatgac ttctcatagg aagtcatttg gtgttggagg
1141 tgggtttctc acctggggct ctacgagatg ttgctggggc tccaccttaa attgtgacta
1201 aaaacagttt tttatttgtg tgctgcatta tgctgttctc acagtagtga gcaatgattg
1261 cgcagccctg ttaacagttt ttttagggat ctttcagcct ttatggtatt acgtagaggc
1321 agacccatgt gctgctgttg caaagagggg aggataggag ggggatgttg gcctctccca
1381 ggctcctctt ctgcagtgcc agctgactta agggagtgaa ctacctgtga agtagaaaat
1441 cagagggaag ttttcattct aaggaaggag tttttacatg ccacagctca gctgtctgcc
1501 tgccactttg ttgtaaacat tgcaaaaatg tggatcatgt aggttagaag tgaattgttt
1561 agtgaagttt ttgtactttt gtgattttct tgtttatgtc tgtttttttt tttttttttt
1621 aacatttgtg tgtaatatag ctgacagtcc agtgtcgcaa ttttggaagg caagatgtga
1681 gagagacgag aaccatttta ggcatagaac tacagacatt tctgaaaagg ttggtgatga
1741 agaacttcag tcttctgagt atacttcagt atactagtgc aacaagggac acaaagaaat
1801 tctgtcttaa taaagaaagc tacttctcaa gggtattatg tggactcagt ccaagctctc
1861 ctgtcccatt gtgcattgtc tgtgacatgc aacttacaaa actagcaatt gtaacaataa
1921 atcacagcca cttgacaaga aaggatattc attattttca aatggctttt ggactatcaa
1981 aaacagtaag gcttttgttc agaaatcacc tttagtcaaa aggtttaaga agcaaattat
2041 ttagtagcag aacttatctc aggaaaggaa aatatgcatg gttggtgaga atctaataac
2101 attaaaatgc tggggcaaga tgcagtacaa agttgaagag actttattct caataagttg
2161 atttactgat gatatgtcat atgatgcaaa aaaggttttg tgtcattaac tgaaaagtag
2221 cagcttctct atccaggatg atgagtcaac aggtttcact aatatttgtc atgctgtagc
2281 atttgtaaga tttgtaaatg atgaaattca aagaaaactt tttctattgc taggagcctg
2341 ccagaacaaa ggccaatata taatgttgtg acatcatatc tgataaccag aggtctggta
2401 tctacactcc tggtgcccca tcagtggttg tctccataag tcattttgcg ttattaaaaa
2461 aaaaaaaaga aatcctgatg ttgacattat agcacactgc tttctccaca gagatgctga
2521 tatcaaaaac ttgaagatac agtgaagttc tgaataatgt tacaaaactg gttacctgta
2581 tcaaagaccc atttatgcaa aaatgttaaa aaaaaaaaaa aaaaaa
//