LOCUS BC000385 3431 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens catenin (cadherin-associated protein), alpha 1,
102kDa, mRNA (cDNA clone MGC:8429 IMAGE:2821111), complete cds.
ACCESSION BC000385
VERSION BC000385.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3431)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3431)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000385.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: e Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55770843.
FEATURES Location/Qualifiers
source 1..3431
/db_xref="H-InvDB:HIT000029574"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8429 IMAGE:2821111"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3431
/gene="CTNNA1"
/gene_synonym="CAP102"
/db_xref="GeneID:1495"
/db_xref="HGNC:HGNC:2509"
/db_xref="MIM:116805"
CDS 66..2786
/gene="CTNNA1"
/gene_synonym="CAP102"
/codon_start=1
/product="catenin (cadherin-associated protein), alpha 1,
102kDa"
/protein_id="AAH00385.1"
/db_xref="GeneID:1495"
/db_xref="HGNC:HGNC:2509"
/db_xref="MIM:116805"
/translation="MTAVHAGNINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNTNS
KGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAKESQFLKEELVAAVEDVRKQGD
LMKAAAGEFADDPCSSVKRGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEDG
ILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGHRDQMAAARGILQKNV
PILYTASQACLQHPDVAAYKANRDLIYKQLQQAVTGISNAAQATASDDASQHQGGGGG
ELAYALNNFDKQIIVDPLSFSEERFRPSLEERLESIISGAALMADSSCTRDDRRERIV
AECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDHVSD
SFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLV
RMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSI
DDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPG
VYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRD
IRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKA
KIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTS
DVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKA
EVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPA
VSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKAMDSI"
BASE COUNT 1000 a 767 c 890 g 774 t
ORIGIN
1 agacaaagca gcgcccgtct gcttcgggcc tctggaattt agcgctcgcc cagctagccg
61 cagaaatgac tgctgtccat gcaggcaaca taaacttcaa gtgggatcct aaaagtctag
121 agatcaggac tctggcagtt gagagactgt tggagcctct tgttacacag gttacaaccc
181 ttgtaaacac caatagtaaa gggccctcta ataagaagag aggtcgttct aagaaggccc
241 atgttttggc tgcatctgtt gaacaagcaa ctgagaattt cttggagaag ggggataaaa
301 ttgcgaagga gagccagttt ctcaaggagg agcttgtggc tgctgtagaa gatgttcgaa
361 aacaaggtga tttgatgaag gctgctgcag gagagttcgc agatgatccc tgctcttctg
421 tgaagcgagg caacatggtt cgggcagctc gagctttgct ctctgctgtt acccggttgc
481 tgattttggc tgacatggca gatgtctaca aattacttgt tcagctgaaa gttgtggaag
541 atggtatctt gaagttgagg aatgctggca atgaacaaga cttaggaatc cagtataaag
601 ccctaaaacc tgaagtggat aagctgaaca ttatggcagc caaaagacaa caggaattga
661 aagatgttgg ccatcgtgat cagatggctg cagctagagg aatcctgcag aagaacgttc
721 cgatcctcta tactgcatcc caggcatgcc tacagcaccc tgatgtcgca gcctataagg
781 ccaacaggga cctgatatac aagcagctgc agcaggcggt cacaggcatt tccaatgcag
841 cccaggccac tgcctcagac gatgcctcac agcaccaggg tggaggagga ggagaactgg
901 catatgcact caataacttt gacaaacaaa tcattgtgga ccccttgagc ttcagcgagg
961 agcgctttag gccttccctg gaggagcgtc tggaaagcat cattagtggg gctgccttga
1021 tggccgactc gtcctgcacg cgtgatgacc gtcgtgagcg aattgtggca gagtgtaatg
1081 ctgtccgcca ggccctgcag gacctgcttt cggagtacat gggcaatgct ggacgtaaag
1141 aaagaagtga tgcactcaat tctgcaatag ataaaatgac caagaagacc agggacttgc
1201 gtagacagct ccgcaaagct gtcatggacc acgtttcaga ttctttcctg gaaaccaatg
1261 ttccactttt ggtattgatt gaagctgcaa agaatggaaa tgagaaagaa gttaaggagt
1321 atgcccaagt tttccgtgaa catgccaaca aattgattga ggttgccaac ttggcctgtt
1381 ccatctcaaa taatgaagaa ggtgtaaagc ttgttcgaat gtctgcaagc cagttagaag
1441 ccctctgtcc tcaggttatt aatgctgcac tggctttagc agcaaaacca cagagtaaac
1501 tggcccaaga gaacatggat ctttttaaag aacaatggga aaaacaagtc cgtgttctca
1561 cagatgctgt cgatgacatt acttccattg atgacttctt ggctgtctca gagaatcaca
1621 ttttggaaga tgtgaacaaa tgtgtcattg ctctccaaga gaaggatgtg gatggcctgg
1681 accgcacagc tggtgcaatt cgaggccggg cagcccgggt cattcacgta gtcacctcag
1741 agatggacaa ctatgagcca ggagtctaca cagagaaggt tctggaagcc actaagctgc
1801 tctccaacac agtcatgcca cgttttactg agcaagtaga agcagccgtg gaagccctca
1861 gctcggaccc tgcccagccc atggatgaga atgagtttat cgatgcttcc cgcctggtat
1921 atgatggcat ccgggacatc aggaaagcag tgctgatgat aaggacccct gaggagttgg
1981 atgactctga ctttgagaca gaagattttg atgtcagaag caggacgagc gtccagacag
2041 aagacgatca gctgatagct ggccagagtg cccgggcgat catggctcag cttccccagg
2101 agcaaaaagc gaagattgcg gaacaggtgg ccagcttcca ggaagaaaag agcaagctgg
2161 atgctgaagt gtccaaatgg gacgacagtg gcaatgacat cattgtgctg gccaagcaga
2221 tgtgcatgat tatgatggag atgacagact ttacccgagg taaaggacca ctcaaaaata
2281 catcggatgt catcagtgct gccaagaaaa ttgctgaggc aggatccagg atggacaagc
2341 ttggccgcac cattgcagac cattgccccg actcggcttg caagcaggac ctgctggcct
2401 acctgcaacg catcgccctc tactgccacc agctgaacat ctgcagcaag gtcaaggccg
2461 aggtgcagaa tctcggcggg gagcttgttg tctctggggt ggacagcgcc atgtccctga
2521 tccaggcagc caagaacttg atgaatgctg tggtgcagac agtgaaggca tcctacgtcg
2581 cctctaccaa ataccaaaag tcacagggta tggcttccct caaccttcct gctgtgtcat
2641 ggaagatgaa ggcaccagag aaaaagccat tggtgaagag agagaaacag gatgagacac
2701 agaccaagat taaacgggca tctcagaaga agcacgtgaa cccggtgcag gccctcagcg
2761 agttcaaagc tatggacagc atctaagtct gcccaggccg gccgccccca cccctcgggg
2821 ctcctgaata tcagtcactg ttcgtcactc aaatgaattt gctaaataca acactgatac
2881 tagattccac agggaaatgg gcagactgaa ccagtccagg tggtgaattt tccaagaaca
2941 tagtttaagt tgattaaaaa tgcttttaga atgcaggagc ctacttctag ctgtattttt
3001 tgtatgctta aataaaaata aaaattcata accaaagaga atcccacatt agcttgttag
3061 taatgctctg accaagccga gatgcccatt ctcttagtga tggcggcgtt agggtttgag
3121 agaagggaat ttggctcaac ttcagttgag agggtgcagt ccagacagct tgactgcttt
3181 taaatgacca aagatgacct gtggtaagca acctgggcat cttaggaagc agtccctgga
3241 gaaggcatgt tcccagaaag gtctctggag ggacaaactc actcagtaaa acataatgta
3301 tcatgaagaa aactgattct ctatgacatg aaatgaaaat tttaatgcat tgttataatt
3361 actaatgtac gctgctgcag gacattaata aagttgcttt tttaggctaa aaaaaaaaaa
3421 aaaaaaaaaa a
//