LOCUS BC000381 1311 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens TBP-like 1, mRNA (cDNA clone MGC:8389 IMAGE:2820491),
complete cds.
ACCESSION BC000381
VERSION BC000381.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1311)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1311)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC000381.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: c Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21071068.
FEATURES Location/Qualifiers
source 1..1311
/db_xref="H-InvDB:HIT000029570"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8389 IMAGE:2820491"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1311
/gene="TBPL1"
/gene_synonym="MGC:8389"
/gene_synonym="MGC:9620"
/gene_synonym="STUD"
/gene_synonym="TLF"
/gene_synonym="TLP"
/gene_synonym="TRF2"
/db_xref="GeneID:9519"
/db_xref="HGNC:HGNC:11589"
/db_xref="MIM:605521"
CDS 276..836
/gene="TBPL1"
/gene_synonym="MGC:8389"
/gene_synonym="MGC:9620"
/gene_synonym="STUD"
/gene_synonym="TLF"
/gene_synonym="TLP"
/gene_synonym="TRF2"
/codon_start=1
/product="TBP-like 1"
/protein_id="AAH00381.1"
/db_xref="GeneID:9519"
/db_xref="HGNC:HGNC:11589"
/db_xref="MIM:605521"
/translation="MDADSDVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDA
GKVLMKLRKPRITATIWSSGKIICTGATSEEEAKFGARRLARSLQKLGFQVIFTDFKV
VNVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVT
GPNVKAVATAVEQIYPFVFESRKEIL"
BASE COUNT 401 a 264 c 270 g 376 t
ORIGIN
1 atttattgtc gcggggaagc tgcggccgcc tcgcacccgg aacaacaaag caaggaagac
61 ggagtccgag cctcgggggc tcctagcaac gggccggggc gggagttcca tggagactgg
121 ggagcgcgcc cgtctcatcc tcatccttgt cctccagctt ctccttcgca tccgacgcaa
181 ccggcagcag cgctgccgcc gcgtcctcag ccaccgctcc ctcttcccac ggatgtgatc
241 ttcgtggtgg aaagctaaat tttaaaacca ccccaatgga tgcagacagt gatgttgcat
301 tggacattct aattacaaat gtagtctgtg tttttagaac aagatgtcat ttaaacttaa
361 ggaagattgc tttggaagga gcaaatgtaa tttataaacg tgatgctgga aaagtattaa
421 tgaagcttag aaaacctaga attacagcta caatttggtc ctcaggaaaa attatttgca
481 ctggagcaac aagtgaagaa gaagctaaat ttggtgccag acgcttagcc cgtagtctgc
541 agaaactagg ttttcaggta atatttacag attttaaggt tgttaacgtt ctggcagtgt
601 gtaacatgcc atttgaaatc cgtttgccag aattcacaaa gaacaataga cctcatgcca
661 gttacgaacc tgaacttcat cctgctgtgt gctatcggat aaaatctcta agagctacat
721 tacagatttt ttcaacagga agtatcacag taacagggcc caatgtaaag gctgttgcta
781 ctgctgtgga acagatttac ccatttgtgt ttgaaagcag gaaagaaatt ttataattca
841 ccacttaatt ggttagaatc tctaactgag caccttttaa acctgctgca cattggactc
901 aaaaggaaaa ctggaccaac aataattgag gaaatagact cttttattca ttcacggcta
961 cagtgtaagc tccagtccct ttggatttta ttccaaacct tgctgtaata taaaaggaag
1021 tttacaagac atgatattgc tgcttttaca aaaggacatt ctatttattt tcgcagtaat
1081 tctcatgtcc ccataagcag agctgtcaca gtgtgcacta ccttagattg ttttattgtc
1141 gtcattgtta tttttttcca ttttgagcta atgtgtttta tttgtgaata gtcttttaca
1201 tttttgtatg ctgaatatgg gcaccaaaga acctgtaaaa gttatctttt tcaattgaat
1261 gtgcacaaat aaaagtttgg aaaagaaaaa aaaaaaaaaa aaaaaaaaaa a
//