LOCUS BC000379 989 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:8385 IMAGE:2820408),
complete cds.
ACCESSION BC000379
VERSION BC000379.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 989)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 989)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000379.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: c Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22538474.
FEATURES Location/Qualifiers
source 1..989
/db_xref="H-InvDB:HIT000029568"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8385 IMAGE:2820408"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..989
/gene="UBB"
/gene_synonym="MGC8385"
/db_xref="GeneID:7314"
/db_xref="HGNC:HGNC:12463"
/db_xref="MIM:191339"
CDS 139..828
/gene="UBB"
/gene_synonym="MGC8385"
/codon_start=1
/product="ubiquitin B"
/protein_id="AAH00379.1"
/db_xref="GeneID:7314"
/db_xref="HGNC:HGNC:12463"
/db_xref="MIM:191339"
/translation="MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV
KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST
LHLVLRLRGGC"
BASE COUNT 266 a 255 c 257 g 211 t
ORIGIN
1 cactcgttgc ataaatttgc gctccgccag cccggagcat ttaggggcgg ttggctttgt
61 tgggtgagct tgtttgtgtc cctgtgggtg gacgtggttg gtgattggca ggatcctggt
121 atccgctaac aggtcaaaat gcagatcttc gtgaaaaccc ttaccggcaa gaccatcacc
181 cttgaggtgg agcccagtga caccatcgaa aatgtgaagg ccaagatcca ggataaggaa
241 ggcattcccc ccgaccagca gaggctcatc tttgcaggca agcagctgga agacggccgt
301 actctttctg actacaacat ccagaaggag tcgaccctgc acctggtcct gcgtctgaga
361 ggtggtatgc agatcttcgt gaagaccctg accggcaaga ccatcaccct ggaagtggag
421 cccagtgaca ccatcgaaaa tgtgaaggcc aagatccagg ataaagaagg catccctccc
481 gaccagcaga ggctcatctt tgcaggcaag cagctggaag atggccgcac tctttctgac
541 tacaacatcc agaaggagtc gaccctgcac ctggtcctgc gtctgagagg tggtatgcag
601 atcttcgtga agaccctgac cggcaagacc atcactctgg aggtggagcc cagtgacacc
661 atcgaaaatg tgaaggccaa gatccaagat aaagaaggca tcccccccga ccagcagagg
721 ctcatctttg caggcaagca gctggaagat ggccgcactc tttctgacta caacatccag
781 aaagagtcga ccctgcacct ggtcctgcgc ctgaggggtg gctgttaatt cttcagtcat
841 ggcattcgca gtgcccagtg atggcattac tctgcactat agccatttgc cccaacttaa
901 gtttagaaat tacaagtttc agtaatagct gaacctgttc aaaatgttaa taaaggtttc
961 gttgcatggt aaaaaaaaaa aaaaaaaaa
//