LOCUS BC000355 2050 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein K, mRNA (cDNA
clone MGC:8660 IMAGE:2964383), complete cds.
ACCESSION BC000355
VERSION BC000355.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2050)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2050)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000355.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: o Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14165436.
FEATURES Location/Qualifiers
source 1..2050
/db_xref="H-InvDB:HIT000029547"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8660 IMAGE:2964383"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2050
/gene="HNRPK"
/gene_synonym="CSBP"
/gene_synonym="HNRNPK"
/gene_synonym="TUNP"
/db_xref="GeneID:3190"
/db_xref="HGNC:HGNC:5044"
/db_xref="MIM:600712"
CDS 123..1517
/gene="HNRPK"
/gene_synonym="CSBP"
/gene_synonym="HNRNPK"
/gene_synonym="TUNP"
/codon_start=1
/product="heterogeneous nuclear ribonucleoprotein K"
/protein_id="AAH00355.1"
/db_xref="GeneID:3190"
/db_xref="HGNC:HGNC:5044"
/db_xref="MIM:600712"
/translation="METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVE
LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILK
KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGII
GVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPI
KGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPS
RRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYD
GMVGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQV
TIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL
LQNSVKQYADVEGF"
BASE COUNT 600 a 402 c 503 g 545 t
ORIGIN
1 cggcagtctc gcgcggctac tgcagcactg gggtgtcagt tgttggtccg acccagaacg
61 cttcagttct gctctgcaag gatatataat aactgattgg tgtgcccgtt taataaaaga
121 atatggaaac tgaacagcca gaagaaacct tccctaacac tgaaaccaat ggtgaatttg
181 gtaaacgccc tgcagaagat atggaagagg aacaagcatt taaaagatct agaaacactg
241 atgagatggt tgaattacgc attctgcttc agagcaagaa tgctggggca gtgattggaa
301 aaggaggcaa gaatattaag gctctccgta cagactacaa tgccagtgtt tcagtcccag
361 acagcagtgg ccccgagcgc atattgagta tcagtgctga tattgaaaca attggagaaa
421 ttctgaagaa aatcatccct accttggaag agggcctgca gttgccatca cccactgcaa
481 ccagccagct cccgctcgaa tctgatgctg tggaatgctt aaattaccaa cactataaag
541 gaagtgactt tgactgcgag ttgaggctgt tgattcatca gagtctagca ggaggaatta
601 ttggggtcaa aggtgctaaa atcaaagaac ttcgagagaa cactcaaacc accatcaagc
661 ttttccagga atgctgtcct cattccactg acagagttgt tcttattgga ggaaaacccg
721 atagggttgt agagtgcata aagatcatcc ttgatcttat atctgagtct cccatcaaag
781 gacgtgcaca gccttatgat cccaattttt acgatgaaac ctatgattat ggtggtttta
841 caatgatgtt tgatgaccgt cgcggacgcc cagtgggatt tcccatgcgg ggaagaggtg
901 gttttgacag aatgcctcct ggtcggggtg ggcgtcccat gcctccatct agaagagatt
961 atgatgatat gagccctcgt cgaggaccac ctccccctcc tcccggacga ggcggccggg
1021 gtggtagcag agctcggaat cttcctcttc ctccaccacc accacctaga gggggagacc
1081 tcatggccta tgacagaaga gggagacctg gagaccgtta cgacggcatg gttggtttca
1141 gtgctgatga aacttgggac tctgcaatag atacatggag cccatcagaa tggcagatgg
1201 cttatgaacc acagggtggc tccggatatg attattccta tgcagggggt cgtggctcat
1261 atggtgatct tggtggacct attattacta cacaagtaac tattcccaaa gatttggctg
1321 gatctattat tggcaaaggt ggtcagcgga ttaaacaaat ccgtcatgag tcgggagctt
1381 cgatcaaaat tgatgagcct ttagaaggat ccgaagatcg gatcattacc attacaggaa
1441 cacaggacca gatacagaat gcacagtatt tgctgcagaa cagtgtgaag cagtatgcag
1501 atgttgaagg attctaatgc aagatatttt ttctttttta tagtgtgaag cagtattctg
1561 gaaagttttt ctaagactag tgaagaactg aaggagtcct gcatcttttt ttttttatct
1621 gcttctgttt aaaaagccaa cattcctctg cttcataggt gttctgcatt tgaggtgtag
1681 tgaaatcttt gctgttcacc agatgtaatg ttttagttcc ttacaaacag ggttgggggg
1741 gggaagggcg tgcaaaaact aacattgaaa ttttgaaaca gcagcagagt gagtggattt
1801 tatttttcgt tattgttggt ggtttaaaaa attcccccca tgtaattatt gtgaacacct
1861 tgctttgtgg tcactgtaac atttgggggg tgggacaggg aggaaaagta acaatagtcc
1921 acatgtccct ggcatctgtt cagagcagtg tgcagaatgt aatgctcttt tgtaagaaac
1981 gttttatgat ttttaaaata aatttagtga acctaaaaaa aaaaaaaaaa aaaaaaaaaa
2041 aaaaaaaaaa
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