LOCUS BC000199 1234 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ganglioside-induced differentiation-associated protein
1-like 1, mRNA (cDNA clone MGC:3129 IMAGE:3352559), complete cds.
ACCESSION BC000199
VERSION BC000199.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1234)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1234)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: e Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30581159.
FEATURES Location/Qualifiers
source 1..1234
/db_xref="H-InvDB:HIT000029426"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3129 IMAGE:3352559"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1234
/gene="GDAP1L1"
/gene_synonym="dJ881L22.1"
/gene_synonym="dJ995J12.1.1"
/db_xref="GeneID:78997"
/db_xref="HGNC:HGNC:4213"
CDS 54..1157
/gene="GDAP1L1"
/gene_synonym="dJ881L22.1"
/gene_synonym="dJ995J12.1.1"
/codon_start=1
/product="ganglioside-induced differentiation-associated
protein 1-like 1"
/protein_id="AAH00199.1"
/db_xref="GeneID:78997"
/db_xref="HGNC:HGNC:4213"
/translation="MATPNNLTPTNCSWWPISALESDAAKPAEAPDAPEAASPAHWPR
ESLVLYHWTQSFSSQKVRLVIAEKGLVCEERDVSLPQSEHKEPWFMRLNLGEEVPVII
HRDNIISDYDQIIDYVERTFTGEHVVALMPEVGSLQHARVLQYRELLDALPMDAYTHG
CILHPELTTDSMIPKYATAEIRRHLANATTDLMKLDHEEEPQLSEPYLSKQKKLMAKI
LEHDDVSYLKKILGELAMVLDQIEAELEKRKLENEGQKCELWLCGCAFTLADVLLGAT
LHRLKFLGLSKKYWEDGSRPNLQSFFERVQRRFAFRKVLGDIHTTLLSAVIPNAFRLV
KRKPPSFFGASFLMGSLGGMGYFAYWYLKKKYI"
BASE COUNT 295 a 374 c 350 g 215 t
ORIGIN
1 gagagccgcc gcgccggagc ctccttcttt cctgcctctg attccgggct gtcatggcga
61 cccccaacaa tctgaccccc accaactgca gctggtggcc catctccgcg ctggagagcg
121 atgcggccaa gccagcggag gcccccgacg ctcccgaggc ggccagcccc gcccattggc
181 ccagggagag cctggttctg taccactgga cccagtcctt cagctcgcag aaggtgcggc
241 tggtgatcgc cgagaagggc ctggtgtgcg aggagcggga cgtgagcctg ccacagagcg
301 agcacaagga gccctggttc atgcggctca acctgggcga ggaggtgccc gtcatcatcc
361 accgcgacaa catcatcagt gactatgacc agatcattga ctatgtggag cgcaccttca
421 caggagagca cgtggtggcc ctgatgcccg aggtgggcag cctgcagcac gcacgggtgc
481 tgcagtaccg ggagctgctg gacgcactgc ccatggatgc ctacacgcat ggctgcatcc
541 tgcatcccga gctcaccacc gactccatga tccccaagta cgccacggcc gagatccgca
601 gacatttagc caatgccacc acggacctca tgaaactgga ccatgaagag gagccccagc
661 tctccgagcc ctacctttct aaacaaaaga agctcatggc caagatcttg gagcatgatg
721 atgtgagcta cctgaagaag atcctcgggg aactggccat ggtgctggac cagattgagg
781 cggagctgga gaagaggaag ctggagaacg aggggcagaa atgcgagctg tggctctgtg
841 gctgtgcctt caccctcgct gatgtcctcc tgggagccac cctgcaccgc ctcaagttcc
901 tgggactgtc caagaaatac tgggaagatg gcagccggcc caacctgcag tccttctttg
961 agagggtcca gagacgcttt gccttccgga aagtcctggg tgacatccac accaccctgc
1021 tgtcggccgt catccccaat gctttccggc tggtcaagag gaaaccccca tccttcttcg
1081 gggcgtcctt cctcatgggc tccctgggtg ggatgggcta ctttgcctac tggtacctca
1141 agaaaaaata catctagggc caggcctggg gcttggtgtc tgaaaaaaaa aaaaaaaaaa
1201 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//