LOCUS BC000194 1198 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens protein tyrosine phosphatase-like A domain containing
1, mRNA (cDNA clone IMAGE:3350634).
ACCESSION BC000194
VERSION BC000194.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1198)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1198)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: e Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7705458.
FEATURES Location/Qualifiers
source 1..1198
/db_xref="H-InvDB:HIT000085802"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3350634"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 321 a 255 c 287 g 335 t
ORIGIN
1 ggcgctcagg agcgctaggg tttgaggcct gctttctgct cgcgccagca gagcactacc
61 tgaggcagcg aggcgcagcg agcctagcct ccccgcgccc tgggcagtgt ggccatggag
121 aatcaggtgt tgacgccgca tgtctactgg gctcagcgac accgcgagct atatctgcgc
181 gtggagctga gtgacgtaca gaaccctgcc atcagcatca ctgaaaacgt gctgcatttc
241 aaagctcaag gacatggtgc caaaggagac aatgtctatg aatttcacct ggagttctta
301 gaccttgtga aaccagagcc tgtttacaaa ctgacccaga ggcaggtaaa cattacagta
361 cagaagaaag tgagtcagtg gtgggagaga ctcacaaagc aggaaaagcg accactgttt
421 ttggctcctg actttgatcg ttggctggat gaatctgatg cggaaatgga gctcagagct
481 aaggaagaag agcgcctaaa taaactccga ctggaaagcg aaggctctcc tgaaactctt
541 acaaacttaa ggaaaggata cctgtttatg tataatcttg tgcaattctt gggattctcc
601 tggatctttg tcaacctgac tgtgcgattc tgtatcttgg gaaaagagtc cttttatgac
661 acattccata ctgtggctga catgatgtat ttctgccaga tgctggcagt tgtggaaact
721 atcaatgcag caattggagt cactacgtca ccggtgctgc cttctctgat ccagcttctt
781 ggaagaaatt ttattttgtt tatcatcttt ggcaccatgg aagaaatgca gaacaaagct
841 gtggttttct ttgtgtttta tttgtggagt gcaattgaaa ttttcaggta ctctttctac
901 atgctgacgt gcattgacat ggattggaag gtgctcacat ggcttcgtta cactctgtgg
961 attcccttat atccactggg atgtttggcg gaagctgtct cagtgattca gtccattcca
1021 atattcaatg agaccggacg attcagtttc acattgccat atccagtgaa aatcaaagtt
1081 agattttcct tttttcttca gatttatctt ataatgatat ttttaggttt atacataaat
1141 tttcgtcacc tttataaaca gcgcagacgg cgctatggac aaaaaaaaaa aaaaaaaa
//