LOCUS BC000149 2331 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens replication factor C (activator 1) 3, 38kDa, mRNA
(cDNA clone MGC:5276 IMAGE:2900958), complete cds.
ACCESSION BC000149
VERSION BC000149.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2331)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2331)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Feb 14, 2001 this sequence version replaced BC000149.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: i Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31795537.
FEATURES Location/Qualifiers
source 1..2331
/db_xref="H-InvDB:HIT000029385"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5276 IMAGE:2900958"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2331
/gene="RFC3"
/gene_synonym="MGC5276"
/gene_synonym="RFC38"
/db_xref="GeneID:5983"
/db_xref="HGNC:HGNC:9971"
/db_xref="MIM:600405"
CDS 42..1112
/gene="RFC3"
/gene_synonym="MGC5276"
/gene_synonym="RFC38"
/codon_start=1
/product="replication factor C (activator 1) 3, 38kDa"
/protein_id="AAH00149.1"
/db_xref="GeneID:5983"
/db_xref="HGNC:HGNC:9971"
/db_xref="MIM:600405"
/translation="MSLWVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPS
GAGKKTRIMCILRELYGVGVEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGN
SDRVVIQEMLKTVAQSQQLETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCR
LILCCNSTSKVIPPIRSRCLAVRVPAPSIEDICHVLSTVCKKEGLNLPSQLAHRLAEK
SCRNLRKALLMCEACRVQQYPFTADQEIPETDWEVYLRETANAIVSQQTPQRLLEVRG
RLYELLTHCIPPEIIMKGLLSELLHNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEA
FVAKFMALYKKFMEDGLEGMMF"
BASE COUNT 696 a 417 c 465 g 753 t
ORIGIN
1 gcgggatttt caagcgtagg cccccgggaa ctcgagctgc catgagcctc tgggtggaca
61 agtatcggcc ctgctccttg ggacggctgg actatcacaa ggagcaggcg gcccagctgc
121 ggaacctggt gcagtgtggt gactttcctc atctgttagt gtacggacca tcaggtgctg
181 gaaaaaagac aagaattatg tgtattctac gtgaacttta tggtgttgga gtggaaaaat
241 tgagaattga acatcagacc atcacaactc catctaaaaa aaaaattgaa attagcacca
301 ttgcaagtaa ctaccacctt gaagttaatc ctagtgatgc tggaaatagt gaccgagtag
361 tcattcagga gatgttgaaa acagtggcac aatcacaaca acttgaaaca aactctcaaa
421 gggattttaa agtggtatta ttgacagaag ttgacaaact caccaaagat gctcagcatg
481 ccttgcgaag aaccatggaa aaatatatgt ctacctgcag attgatcttg tgctgcaatt
541 ctacatctaa agtgatccca cctattcgta gtaggtgctt ggcggttcgt gtgcctgctc
601 ccagcattga agatatttgc cacgtgttat ctactgtgtg taagaaggaa ggtctgaatc
661 ttccttcaca actggctcat agacttgcag agaagtcttg tagaaatctc agaaaagccc
721 tgcttatgtg tgaagcctgc agagtgcaac aatatccttt tactgcagat caagaaatcc
781 ctgagacaga ttgggaggtg tatctgaggg agactgcaaa tgctattgtc agtcagcaaa
841 ctccacaaag gctccttgaa gttcgtggaa ggctgtatga gcttctaact cattgtattc
901 ctcctgagat aataatgaag ggccttctct cagaactgtt acataattgt gatggacaac
961 tgaaagggga ggtggcacaa atggcagctt actatgagca tcgtctacag ctgggtagca
1021 aagccattta tcacttggaa gcgtttgtgg ccaaattcat ggcactttat aagaagttca
1081 tggaggatgg attggaaggc atgatgttct gacttctgtc agttattctt gcaaagattt
1141 ctcagtatca gtatttacat acagcttata ttaaaagagc tgtgggtaaa ttaactgaac
1201 ttaatcatgt cgtatttgcg tttttttggt aataacttct ctgtgaacta ttaatcatcc
1261 tctgagttaa ataattgctc ctatactatt gaagtatgta gttttgtaca taacttagag
1321 actttagagt ctaagaaaat gatcttaatt tactttaagc attggttatt caagtattca
1381 ttgttgatcc tcctattctc ttccgtctaa tctctcacct gctaaaggag atttacacat
1441 tagaaagcaa agattatttt catttatcca gatgaccatt ttctgccaca ggtaacatga
1501 ttgtttgaca caccattata tttaattcta gtttctctca atgaataatt gtatttttgt
1561 aggaaatgta agatttcatt ctgaaacata attattggta tggacaaaat tgcagatacc
1621 atttctgttg aggctgcaga tttccaactt ttatttcagt ggttcagatt agtattaggt
1681 cggtactaag aaataagcat gttttcacta atttaagtac ttgagactct tgaagaaaat
1741 tcagaatgaa gttctggaga aaggtatgtt actgtagtaa ttactctttg aacaggtttt
1801 gtgttttgtc attagctctg ccctttttaa ttaaatattt tggttcatgg accaaagggt
1861 ttacttgaca aatttgtgtg acagactccg aacaattcct ttactacgaa gtataattta
1921 taaaataaaa tatacccatt ttaagggtac agtttgattt ttgaccagtg aaactatgat
1981 cccaatcaag gtatagatgc cgtcacccca aaaagttccc tccatatccc tttgcagtca
2041 gttcatccct accctggccc agatgatcac tgatcttgtc attatagatg agttttgcca
2101 gttcaagaat ttaatggaat cagatattgt aagcattctt gtgtaatact tcattctctc
2161 tcattattga gattcatcca tattgttgaa tgtttcacta gttaatgttt attgttcaat
2221 atttttgtat atacttttaa agcctattca cttgctgatg gatctttggt ttgtttccag
2281 gtttggttat tatgaataaa gttgctgtga ataaaaaaaa aaaaaaaaaa a
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