LOCUS BC000123 1331 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens pyridoxal (pyridoxine, vitamin B6) kinase, mRNA (cDNA
clone MGC:3128 IMAGE:3352536), complete cds.
ACCESSION BC000123
VERSION BC000123.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1331)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1331)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: a Column: 15.
FEATURES Location/Qualifiers
source 1..1331
/db_xref="H-InvDB:HIT000029363"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3128 IMAGE:3352536"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1331
/gene="PDXK"
/gene_synonym="C21orf97"
/gene_synonym="PKH"
/gene_synonym="PNK"
/db_xref="GeneID:8566"
/db_xref="HGNC:HGNC:8819"
/db_xref="MIM:179020"
CDS 184..1122
/gene="PDXK"
/gene_synonym="C21orf97"
/gene_synonym="PKH"
/gene_synonym="PNK"
/codon_start=1
/product="pyridoxal (pyridoxine, vitamin B6) kinase"
/protein_id="AAH00123.1"
/db_xref="GeneID:8566"
/db_xref="HGNC:HGNC:8819"
/db_xref="MIM:179020"
/translation="MEEECRVLSIQSHVIRGYVGNRAATFPLQVLGFEIDAVNSVQFS
NHTGYAHWKGQVLNSDELQELYEGLRLNNMNKYDYVLTGYTRDKSFLAMVVDIVQELK
QQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPNQFEAELLSGR
KIHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMER
IRMDIRKVDAVFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSTLHHVLQRTIQCAKA
QAGEGVRPSPMQLELRMVQSKRDIEDPEIVVQATVL"
BASE COUNT 293 a 372 c 421 g 245 t
ORIGIN
1 cggagccgcc cgctgaggtc agaaggaggc gtctgcgctg atcgggtccg ccgcgcgcca
61 gagccagagt cgcagccgag gggagccggg gccggagccc gagcccgagc cgagccggag
121 cccgagcgag cggcggagac cgtgcccccg cctcggcccc gcgccgccgc ggccaggccc
181 ggcatggagg aggagtgccg ggtgctctcc atacagagcc acgtcatccg cggctacgtg
241 ggcaaccggg cggccacgtt cccgctgcag gttttgggat ttgagattga cgcggtgaac
301 tctgtccagt tttcaaacca cacaggctat gcccactgga agggccaagt gctgaattca
361 gatgagctcc aggagttgta cgaaggcctg aggctgaaca acatgaataa atatgactac
421 gtgctcacag gttatacgag ggacaagtcg ttcctggcca tggtggtgga cattgtgcag
481 gagctgaagc agcagaaccc caggctggtg tacgtgtgtg atccagtctt gggtgacaag
541 tgggacggcg aaggctcgat gtacgtcccg gaggacctcc ttcccgtcta caaagaaaaa
601 gtggtgccgc ttgcagacat tatcacgccc aaccagtttg aggccgagtt actgagtggc
661 cggaagatcc acagccagga ggaagccttg cgggtgatgg acatgctgca ctctatgggc
721 cccgacaccg tggtcatcac cagctccgac ctgccctccc cgcagggcag caactacctg
781 attgtgctgg ggagtcagag gaggaggaat cccgctggct ccgtggtgat ggaacgcatc
841 cggatggaca ttcgcaaagt ggacgccgtc tttgtgggca ctggggacct gtttgctgcc
901 atgctcctgg cgtggacaca caagcacccc aataacctca aggtggcctg tgagaagacc
961 gtgtctacct tgcaccacgt tctgcagagg accatccagt gtgcaaaagc ccaggccggg
1021 gaaggagtga ggcccagccc catgcagctg gagctgcgga tggtgcagag caaaagggac
1081 atcgaggacc cagagatcgt cgtccaggcc acggtgctgt gagggccccg ccgcttgccc
1141 gtgacacgca gcgcgttggt gtctccgtgt ttgtccctgt gaaaacatgt aacgtctgcc
1201 ttagagccat gaccgaaact tgatattttt ttctttcatg agtgtccggc atctgctggt
1261 cttcattgtg aaacgtgcca gtcgtgcttt gtgaaaaata acaaagtggt cacaaaaaaa
1321 aaaaaaaaaa a
//