LOCUS BC000111 1551 bp mRNA linear HUM 25-MAR-2004
DEFINITION Homo sapiens transmembrane protein 22, mRNA (cDNA clone MGC:3295
IMAGE:3508204), complete cds.
ACCESSION BC000111
VERSION BC000111.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1551)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1551)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376859.
FEATURES Location/Qualifiers
source 1..1551
/db_xref="H-InvDB:HIT000029353"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3295 IMAGE:3508204"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1551
/gene="TMEM22"
/gene_synonym="DKFZp564K2464"
/gene_synonym="MGC3295"
/db_xref="GeneID:80723"
CDS 171..1343
/gene="TMEM22"
/gene_synonym="DKFZp564K2464"
/gene_synonym="MGC3295"
/codon_start=1
/product="TMEM22 protein"
/protein_id="AAH00111.1"
/db_xref="GeneID:80723"
/translation="MVKYTSHYPQPGDDGYEEINEGYGNFMEENPKKGLLSEMKKKGR
AFFGTMDTLPPPTEDPMINEIGQFQSFAEKNIFQSRKMWIVLFGSALAHGCVALITRL
VSDRSKVPSLELIFIRSVFQVLSVLVVCYYQEAPFGPSGYRLRLFFYGVCNVISITCA
YTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEKMAYVDMATVVCSILGVCLVMIPN
IVDEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYRSIKEKISMWTALFTFGWTGTIW
GISTMFILQEPIIPLDGETWSYLIAICVCSTAAFLGVYYALDKFHPALVSTVQHLEIV
VAMVLQLLVLHIFPSIYDVFGGVIIMISVFVLAGYKLYWRNLRRQDYQEILDSPIK"
misc_feature 489..818
/gene="TMEM22"
/gene_synonym="DKFZp564K2464"
/gene_synonym="MGC3295"
/note="DUF6; Region: Integral membrane protein DUF6. This
family includes many hypothetical membrane proteins of
unknown function. Many of the proteins contain two copies
of the aligned region"
/db_xref="CDD:pfam00892"
misc_feature 900..1268
/gene="TMEM22"
/gene_synonym="DKFZp564K2464"
/gene_synonym="MGC3295"
/note="DUF6; Region: Integral membrane protein DUF6. This
family includes many hypothetical membrane proteins of
unknown function. Many of the proteins contain two copies
of the aligned region"
/db_xref="CDD:pfam00892"
BASE COUNT 450 a 297 c 312 g 492 t
ORIGIN
1 ccggacggcg cccgcctcga ttttcccagg cgagggcacg cccgcgtcag tcgcctccgg
61 ggcaccttcc tcgccacgac acgcagaatt aattatctga agaaatggat acttctccct
121 ccagaaaata tccagttaaa aaacgggtga aaatacatcc caacacagtg atggtgaaat
181 atacttctca ttatccccag cctggcgatg atggatatga agaaatcaat gaaggctatg
241 ggaattttat ggaggaaaat ccaaagaaag gtctgctgag tgaaatgaaa aaaaaaggga
301 gagctttctt tggaaccatg gataccctac ctccaccaac agaagaccca atgatcaatg
361 agattggaca attccagagc tttgcagaaa aaaacatttt tcaatcccga aaaatgtgga
421 tagtgctgtt tggatctgct ttggctcatg gatgtgtagc tcttatcact aggcttgttt
481 ctgatcggtc taaagttcca tctctagaac tgatttttat ccgttctgtt tttcaggtct
541 tatctgtgtt agttgtgtgt tactatcagg aggccccctt tggacccagt ggatacagat
601 tacgactctt cttttatggt gtatgcaatg tcatttctat cacttgtgct tatacatcat
661 tttcaatagt tcctcccagc aatgggacca ctatgtggag agccacaact acagtcttca
721 gtgccatttt ggctttttta ctcgtagatg agaaaatggc ttatgttgac atggctacag
781 ttgtttgcag catcttaggt gtttgtcttg tcatgatccc aaacattgtt gatgaagaca
841 attctttgtt aaatgcctgg aaagaagcct ttgggtacac catgactgtg atggctggac
901 tgaccactgc tctctcaatg atagtataca gatccatcaa ggagaagatc agcatgtgga
961 ctgcactgtt tacttttggt tggactggga caatttgggg aatatctact atgtttattc
1021 ttcaagaacc catcatccca ttagatggag aaacctggag ttatctcatt gctatatgtg
1081 tctgttctac tgcagcattc ttaggagttt attatgcctt ggacaaattc catccagctt
1141 tggttagcac agtacaacat ttggagattg tggtagctat ggtcttgcag cttctcgtgc
1201 tgcacatatt tcctagcatc tatgatgttt ttggaggggt aatcattatg attagtgttt
1261 ttgtccttgc tggctataaa ctttactgga ggaatttaag aaggcaggac taccaggaaa
1321 tactagactc tcccattaaa tgaatacctg attattattg tctcattaat gttcagttat
1381 taatatgtat actgccattt taatgtttac ctatgaatgt cttttgtgtt atataactga
1441 cagagtgcta taaaatatat aatatataca aatgcagaaa atttattcta gtctaatata
1501 ttcaaataca aatattaaat atatgaaata cgtaaaaaaa aaaaaaaaaa a
//