LOCUS BC000098 758 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens H2A histone family, member V, mRNA (cDNA clone
MGC:1947 IMAGE:3505930), complete cds.
ACCESSION BC000098
VERSION BC000098.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 758)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 758)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000098.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: l Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41406065.
FEATURES Location/Qualifiers
source 1..758
/db_xref="H-InvDB:HIT000029344"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1947 IMAGE:3505930"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..758
/gene="H2AFV"
/gene_synonym="MGC10170"
/gene_synonym="MGC10831"
/gene_synonym="MGC1947"
/db_xref="GeneID:94239"
/db_xref="HGNC:HGNC:20664"
CDS 83..469
/gene="H2AFV"
/gene_synonym="MGC10170"
/gene_synonym="MGC10831"
/gene_synonym="MGC1947"
/codon_start=1
/product="H2A histone family, member V"
/protein_id="AAH00098.1"
/db_xref="GeneID:94239"
/db_xref="HGNC:HGNC:20664"
/translation="MAGGKAGKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSH
GRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIK
ATIAGGGVIPHIHKSLIGKKGQQKTA"
BASE COUNT 215 a 153 c 214 g 176 t
ORIGIN
1 gtgctgcgag agcggcggcg gcggcgcggg tcggcagcgg gagggcgcgc ggccgagcgg
61 aggcggagtc ggcgccgaga acatggctgg aggcaaagct ggaaaggaca gtgggaaggc
121 caaggctaag gcagtatctc gctcacagag agctgggcta cagtttcctg tgggccgcat
181 ccacagacac ttgaagactc gcaccacaag ccatggaagg gtgggtgcca ctgctgccgt
241 gtacagtgct gcgattctgg agtacctcac tgcagaggtg ctggagctgg caggtaatgc
301 ttctaaggat ctcaaagtaa agcgtatcac tccgcgtcac ttgcagcttg caatccgtgg
361 tgatgaagag ttggattctc ttatcaaggc taccatagct gggggtggtg tgatccctca
421 catccacaaa tctctgattg gaaagaaggg acagcagaaa actgcttaga gggatgcttt
481 aaccaaccct cttcctcccc gtcattgtac tgtaactggg acagaagaaa taatggggat
541 atgtggaatt tttaacaaca gttaaatgga aaagcataga caattactgt agacatgata
601 aaagaaacat ttgtatgttc ttagactcga agtttgataa aagtaccttt tcatgtggtg
661 acagttgtgt gttgattggc taggtttctc ccgtgtgttt tatacaaaaa tggaattgat
721 aaaccatttt ttacaaaatt aaaaaaaaaa aaaaaaaa
//