LOCUS BC000097 2716 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transforming growth factor, beta-induced, 68kDa, mRNA
(cDNA clone MGC:1598 IMAGE:3506051), complete cds.
ACCESSION BC000097
VERSION BC000097.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2716)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2716)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000097.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: l Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507466.
FEATURES Location/Qualifiers
source 1..2716
/db_xref="H-InvDB:HIT000029343"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1598 IMAGE:3506051"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2716
/gene="TGFBI"
/gene_synonym="BIGH3"
/gene_synonym="CDB1"
/gene_synonym="CDG2"
/gene_synonym="CDGG1"
/gene_synonym="CSD"
/db_xref="GeneID:7045"
/db_xref="HGNC:HGNC:11771"
/db_xref="MIM:601692"
CDS 55..2106
/gene="TGFBI"
/gene_synonym="BIGH3"
/gene_synonym="CDB1"
/gene_synonym="CDG2"
/gene_synonym="CDGG1"
/gene_synonym="CSD"
/codon_start=1
/product="transforming growth factor, beta-induced, 68kDa"
/protein_id="AAH00097.1"
/db_xref="GeneID:7045"
/db_xref="HGNC:HGNC:11771"
/db_xref="MIM:601692"
/translation="MALFVRLLALALALALGPAATLAGPAKSPYQLVLQHSRLRGRQH
GPNVCAVQKVIGTNRKYFTNCKQWYQRKICGKSTVISYECCPGYEKVPGEKGCPAALP
LSNLYETLGVVGSTTTQLYTDRTEKLRPEMEGPGSFTIFAPSNEAWASLPAEVLDSLV
SNVNIELLNALRYHMVGRRVLTDELKHGMTLTSMYQNSNIQIHHYPNGIVTVNCARLL
KADHHATNGVVHLIDKVISTITNNIQQIIEIEDTFETLRAAVAASGLNTMLEGNGQYT
LLAPTNEAFEKIPSETLNRILGDPEALRDLLNNHILKSAMCAEAIVAGLSVETLEGTT
LEVGCSGDMLTINGKAIISNKDILATNGVIHYIDELLIPDSAKTLFELAAESDVSTAI
DLFRQAGLGNHLSGSERLTLLAPLNSVFKDGTPPIDAHTRNLLRNHIIKDQLASKYLY
HGQTLETLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRVLTPPMGTVMDV
LKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELA
NILKYHIGDEILVSGGIGALVRLKSLQGDKLEVSLKNNVVSVNKEPVAEPDIMATNGV
VHVITNVLQPPANRPQERGDELADSALEIFKQASAFSRASQRSVRLAPVYQKLLERMK
H"
BASE COUNT 696 a 733 c 700 g 587 t
ORIGIN
1 gccgcccgct tgcccgtcgg tcgctagctc gctcggtgcg cgtcgtcccg ctccatggcg
61 ctcttcgtgc ggctgctggc tctcgccctg gctctggccc tgggccccgc cgcgaccctg
121 gcgggtcccg ccaagtcgcc ctaccagctg gtgctgcagc acagcaggct ccggggccgc
181 cagcacggcc ccaacgtgtg tgctgtgcag aaggttattg gcactaatag gaagtacttc
241 accaactgca agcagtggta ccaaaggaaa atctgtggca aatcaacagt catcagctac
301 gagtgctgtc ctggatatga aaaggtccct ggggagaagg gctgtccagc agccctacca
361 ctctcaaacc tttacgagac cctgggagtc gttggatcca ccaccactca gctgtacacg
421 gaccgcacgg agaagctgag gcctgagatg gaggggcccg gcagcttcac catcttcgcc
481 cctagcaacg aggcctgggc ctccttgcca gctgaagtgc tggactccct ggtcagcaat
541 gtcaacattg agctgctcaa tgccctccgc taccatatgg tgggcaggcg agtcctgact
601 gatgagctga aacacggcat gaccctcacc tctatgtacc agaattccaa catccagatc
661 caccactatc ctaatgggat tgtaactgtg aactgtgccc ggctgctgaa agccgaccac
721 catgcaacca acggggtggt gcacctcatc gataaggtca tctccaccat caccaacaac
781 atccagcaga tcattgagat cgaggacacc tttgagaccc ttcgggctgc tgtggctgca
841 tcagggctca acacgatgct tgaaggtaac ggccagtaca cgcttttggc cccgaccaat
901 gaggccttcg agaagatccc tagtgagact ttgaaccgta tcctgggcga cccagaagcc
961 ctgagagacc tgctgaacaa ccacatcttg aagtcagcta tgtgtgctga agccatcgtt
1021 gcggggctgt ctgtggagac cctggagggc acgacactgg aggtgggctg cagcggggac
1081 atgctcacta tcaacgggaa ggcgatcatc tccaataaag acatcctagc caccaacggg
1141 gtgatccact acattgatga gctactcatc ccagactcag ccaagacact atttgaattg
1201 gctgcagagt ctgatgtgtc cacagccatt gaccttttca gacaagccgg cctcggcaat
1261 catctctctg gaagtgagcg gttgaccctc ctggctcccc tgaattctgt attcaaagat
1321 ggaacccctc caattgatgc ccatacaagg aatttgcttc ggaaccacat aattaaagac
1381 cagctggcct ctaagtatct gtaccatgga cagaccctgg aaactctggg cggcaaaaaa
1441 ctgagagttt ttgtttatcg taatagcctt tgcattgaga acagctgcat cgcggcccac
1501 gacaagaggg ggaggtacgg gaccctgttc acgatggacc gggtgctgac ccccccaatg
1561 gggactgtca tggatgtcct gaagggagac aatcgcttta gcatgctggt agctgccatc
1621 cagtctgcag gactgacgga gaccctcaac cgggaaggag tctacacagt cttcgctccc
1681 acaaatgaag ccttccgagc cctgccacca agagaacgga gcagactctt gggagatgcc
1741 aaggaacttg ccaacatcct gaaataccac attggtgatg aaatcctggt tagcggaggc
1801 atcggggccc tggtgcggct aaagtctctc caaggtgaca agctggaagt cagcttgaaa
1861 aacaatgtgg tgagtgtcaa caaggagcct gttgccgagc ctgacatcat ggccacaaat
1921 ggcgtggtcc atgtcatcac caatgttctg cagcctccag ccaacagacc tcaggaaaga
1981 ggggatgaac ttgcagactc tgcgcttgag atcttcaaac aagcatcagc gttttccagg
2041 gcttcccaga ggtctgtgcg actagcccct gtctatcaaa agttattaga gaggatgaag
2101 cattagcttg aagcactaca ggaggaatgc accacggcag ctctccgcca atttctctca
2161 gatttccaca gagactgttt gaatgttttc aaaaccaagt atcacacttt aatgtacatg
2221 ggccgcacca taatgagatg tgagccttgt gcatgtgggg gaggagggag agagatgtac
2281 tttttaaatc atgttccccc taaacatggc tgttaaccca ctgcatgcag aaacttggat
2341 gtcactgcct gacattcact tccagagagg acctatccca aatgtggaat tgactgccta
2401 tgccaagtcc ctggaaaagg agcttcagta ttgtggggct cataaaacat gaatcaagca
2461 atccagcctc atgggaagtc ctggcacagt ttttgtaaag cccttgcaca gctggagaaa
2521 tggcatcatt ataagctatg agttgaaatg ttctgtcaaa tgtgtctcac atctacacgt
2581 ggcttggagg cttttatggg gccctgtcca ggtagaaaag aaatggtatg tagagcttag
2641 atgtccctat tgtgacagag ccatggtgtg tttgtaataa taaaaccaaa gaaacataaa
2701 aaaaaaaaaa aaaaaa
//