LOCUS VTR97429.1 521 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana lysyl-trna synthetase : Lysine--tRNA
ligase OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068
/ ICPB 4128) GN=lysS PE=3 SV=1: tRNA_anti-codon: tRNA-
synt_2 protein.
ACCESSION LR593886-6293
PROTEIN_ID VTR97429.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_07220"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|E8QZV6|E8QZV6_ISOPI ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=Lysine--tRNA ligase
OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 /
IS1B) GN=lysS PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.888"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A3ZMZ1|A3ZMZ1_9PLAN ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Lysine--tRNA ligase
OS=Blastopirellula marina DSM 3645 GN=lysS PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.759"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|Q7UK37|Q7UK37_RHOBA ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Lysine--tRNA ligase
OS=Rhodopirellula baltica (strain SH1) GN=lysS PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.954"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D5SSD4|D5SSD4_PLAL2 ;
ALN/Q_length_ratio=0.921 ; DESCRIPTION=Lysine--tRNA ligase
OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776
/ IFAM 1008 / 290) GN=lysS PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.070"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M5TT57|M5TT57_9PLAN ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Lysine--tRNA ligase
OS=Rhodopirellula sallentina SM41 GN=lysS PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5SZP5|M5SZP5_9PLAN ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Lysine--tRNA ligase
OS=Rhodopirellula sp. SWK7 GN=lysS PE=3 SV=1 ; EVALUE=0.0
; Q/S_length_ratio=0.990"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|L7CAI0|L7CAI0_RHOBT ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Lysine--tRNA ligase
OS=Rhodopirellula baltica SWK14 GN=lysS PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M2A9B7|M2A9B7_9PLAN ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Lysine--tRNA ligase
OS=Rhodopirellula europaea 6C GN=lysS PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.924"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|F2AV26|F2AV26_RHOBT ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Lysine--tRNA ligase
OS=Rhodopirellula baltica WH47 GN=lysS PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.954"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M5R8J5|M5R8J5_9PLAN ;
ALN/Q_length_ratio=0.988 ; DESCRIPTION=Lysine--tRNA ligase
OS=Rhodopirellula maiorica SM1 GN=lysS PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.985"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|F0SK09|F0SK09_PLABD ;
ALN/Q_length_ratio=0.917 ; DESCRIPTION=Lysine--tRNA ligase
OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305
/ JCM 21570 / NBRC 103401 / IFAM 1448) GN=lysS PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.042"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5RWP4|M5RWP4_9PLAN ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Lysine--tRNA ligase
OS=Rhodopirellula europaea SH398 GN=lysS PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|K5ED40|K5ED40_RHOBT ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Lysine--tRNA ligase
OS=Rhodopirellula baltica SH28 GN=lysS PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.954"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L0DIU1|L0DIU1_SINAD ;
ALN/Q_length_ratio=0.927 ; DESCRIPTION=Lysine--tRNA ligase
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=lysS PE=3 SV=1 ; EVALUE=0.0
; Q/S_length_ratio=1.061"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D2R4I5|D2R4I5_PIRSD ;
ALN/Q_length_ratio=0.973 ; DESCRIPTION=Lysine--tRNA ligase
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=lysS PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.987"
/note="Pfam_scan:hit_1 (55..157);
Pfam:PF01336.20:tRNA_anti-codon;
Pfam_type:Domain;HMM_aln_Length:73; HMM_Length:75;
EVALUE:1.8e-08; BITSCORE: 34.0"
/note="Pfam_scan:hit_2 (173..518);
Pfam:PF00152.15:tRNA-synt_2;
Pfam_type:Family;HMM_aln_Length:330; HMM_Length:335;
EVALUE:1.1e-86; BITSCORE: 290.6"
/note="GO_domain:GO:0005737"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0006399"
/note="GO_domain:GO:0006520"
/note="GO_domain:GO:0016874"
/note="GO_domain:GO:0006412"
/note="Enzyme_Code:EC:6.1.1.6"
/note="Enzyme_Code:EC:6.1.1"
BEGIN
1 MPEETSDLAE VRLQKLQQIE ALGLDPWGQR FDNAQPIEQV IALPADLPED QRPRVRIAGR
61 ITSRRSKGKL HFLDISDASG HPVTRRTKGD QSGKYEATEY IGLSSTVQVM IGQNQVGETG
121 WALAQLFDLG DLIGVEGVFG KTRMGELTIF ADKLTFLTKS LEPHPDKWAG MQDIEFVLRH
181 RYLDLTYNPL TLDRAKKRVK IIRTIRTHLD AQGYMEVETP TLHAIAGGAA ARPFETHHNA
241 LDIDLFVRIA LELPLKRLLV GGIEKVYELG RVFRNEGISP RHNPEFTMLE LYQAYGDYRS
301 MMDLTEGLIV ACVDILGGGR TIPFGEKTVN FEPPFQRAKY ADLFREHVGC DMTDEVAVRA
361 AARAENIELE MAPTKGAPKV AKAHVVLVQE LFEDLVEEKL VGPVFVYDYP SPLCPLTKRK
421 RENPAIAERF ELYVHGMELA NAYTELNDPI TQEQTFTQQL AGLSDEDSMA KMDHDFIRAL
481 RHGMPPAGGL GIGIDRLVML LTNTQTIRDV ILFPLLRPEA K
//