LOCUS VTR97429.1 521 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana lysyl-trna synthetase : Lysine--tRNA ligase OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=lysS PE=3 SV=1: tRNA_anti-codon: tRNA- synt_2 protein. ACCESSION LR593886-6293 PROTEIN_ID VTR97429.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_07220" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|E8QZV6|E8QZV6_ISOPI ; ALN/Q_length_ratio=0.940 ; DESCRIPTION=Lysine--tRNA ligase OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=lysS PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.888" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|A3ZMZ1|A3ZMZ1_9PLAN ; ALN/Q_length_ratio=0.944 ; DESCRIPTION=Lysine--tRNA ligase OS=Blastopirellula marina DSM 3645 GN=lysS PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.759" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|Q7UK37|Q7UK37_RHOBA ; ALN/Q_length_ratio=0.979 ; DESCRIPTION=Lysine--tRNA ligase OS=Rhodopirellula baltica (strain SH1) GN=lysS PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.954" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|D5SSD4|D5SSD4_PLAL2 ; ALN/Q_length_ratio=0.921 ; DESCRIPTION=Lysine--tRNA ligase OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=lysS PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.070" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|M5TT57|M5TT57_9PLAN ; ALN/Q_length_ratio=0.992 ; DESCRIPTION=Lysine--tRNA ligase OS=Rhodopirellula sallentina SM41 GN=lysS PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.992" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|M5SZP5|M5SZP5_9PLAN ; ALN/Q_length_ratio=0.979 ; DESCRIPTION=Lysine--tRNA ligase OS=Rhodopirellula sp. SWK7 GN=lysS PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.990" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L7CAI0|L7CAI0_RHOBT ; ALN/Q_length_ratio=0.979 ; DESCRIPTION=Lysine--tRNA ligase OS=Rhodopirellula baltica SWK14 GN=lysS PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.996" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|M2A9B7|M2A9B7_9PLAN ; ALN/Q_length_ratio=0.979 ; DESCRIPTION=Lysine--tRNA ligase OS=Rhodopirellula europaea 6C GN=lysS PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.924" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|F2AV26|F2AV26_RHOBT ; ALN/Q_length_ratio=0.979 ; DESCRIPTION=Lysine--tRNA ligase OS=Rhodopirellula baltica WH47 GN=lysS PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.954" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|M5R8J5|M5R8J5_9PLAN ; ALN/Q_length_ratio=0.988 ; DESCRIPTION=Lysine--tRNA ligase OS=Rhodopirellula maiorica SM1 GN=lysS PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.985" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|F0SK09|F0SK09_PLABD ; ALN/Q_length_ratio=0.917 ; DESCRIPTION=Lysine--tRNA ligase OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=lysS PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.042" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|M5RWP4|M5RWP4_9PLAN ; ALN/Q_length_ratio=0.979 ; DESCRIPTION=Lysine--tRNA ligase OS=Rhodopirellula europaea SH398 GN=lysS PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.996" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|K5ED40|K5ED40_RHOBT ; ALN/Q_length_ratio=0.979 ; DESCRIPTION=Lysine--tRNA ligase OS=Rhodopirellula baltica SH28 GN=lysS PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.954" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DIU1|L0DIU1_SINAD ; ALN/Q_length_ratio=0.927 ; DESCRIPTION=Lysine--tRNA ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=lysS PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.061" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|D2R4I5|D2R4I5_PIRSD ; ALN/Q_length_ratio=0.973 ; DESCRIPTION=Lysine--tRNA ligase OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=lysS PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.987" /note="Pfam_scan:hit_1 (55..157); Pfam:PF01336.20:tRNA_anti-codon; Pfam_type:Domain;HMM_aln_Length:73; HMM_Length:75; EVALUE:1.8e-08; BITSCORE: 34.0" /note="Pfam_scan:hit_2 (173..518); Pfam:PF00152.15:tRNA-synt_2; Pfam_type:Family;HMM_aln_Length:330; HMM_Length:335; EVALUE:1.1e-86; BITSCORE: 290.6" /note="GO_domain:GO:0005737" /note="GO_domain:GO:0043167" /note="GO_domain:GO:0006399" /note="GO_domain:GO:0006520" /note="GO_domain:GO:0016874" /note="GO_domain:GO:0006412" /note="Enzyme_Code:EC:6.1.1.6" /note="Enzyme_Code:EC:6.1.1" BEGIN 1 MPEETSDLAE VRLQKLQQIE ALGLDPWGQR FDNAQPIEQV IALPADLPED QRPRVRIAGR 61 ITSRRSKGKL HFLDISDASG HPVTRRTKGD QSGKYEATEY IGLSSTVQVM IGQNQVGETG 121 WALAQLFDLG DLIGVEGVFG KTRMGELTIF ADKLTFLTKS LEPHPDKWAG MQDIEFVLRH 181 RYLDLTYNPL TLDRAKKRVK IIRTIRTHLD AQGYMEVETP TLHAIAGGAA ARPFETHHNA 241 LDIDLFVRIA LELPLKRLLV GGIEKVYELG RVFRNEGISP RHNPEFTMLE LYQAYGDYRS 301 MMDLTEGLIV ACVDILGGGR TIPFGEKTVN FEPPFQRAKY ADLFREHVGC DMTDEVAVRA 361 AARAENIELE MAPTKGAPKV AKAHVVLVQE LFEDLVEEKL VGPVFVYDYP SPLCPLTKRK 421 RENPAIAERF ELYVHGMELA NAYTELNDPI TQEQTFTQQL AGLSDEDSMA KMDHDFIRAL 481 RHGMPPAGGL GIGIDRLVML LTNTQTIRDV ILFPLLRPEA K //