LOCUS VTR94661.1 589 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma
factor : Uncharacterized protein OS=Isosphaera pallida
(strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_0849 PE=
4 SV=1: Sigma70_r2: Sigma70_r4_2: Peptidase_MA_2 protein.
ACCESSION LR593886-3962
PROTEIN_ID VTR94661.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_30530"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|E8R2F4|E8R2F4_ISOPI ;
ALN/Q_length_ratio=0.445 ; DESCRIPTION=Uncharacterized
protein OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=Isop_0849 PE=4 SV=1 ; EVALUE=9e-49 ;
Q/S_length_ratio=1.673"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DK84|L0DK84_SINAD ;
ALN/Q_length_ratio=0.363 ; DESCRIPTION=Uncharacterized
protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5098 PE=4 SV=1
; EVALUE=4e-47 ; Q/S_length_ratio=2.181"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M5TSN3|M5TSN3_9PLAN ;
ALN/Q_length_ratio=0.396 ; DESCRIPTION=Uncharacterized
protein OS=Rhodopirellula sallentina SM41 GN=RSSM_06470
PE=4 SV=1 ; EVALUE=2e-44 ; Q/S_length_ratio=1.416"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D2R4Q6|D2R4Q6_PIRSD ;
ALN/Q_length_ratio=0.375 ; DESCRIPTION=Uncharacterized
protein OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068
/ ICPB 4128) GN=Psta_2453 PE=4 SV=1 ; EVALUE=8e-44 ;
Q/S_length_ratio=1.264"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A3ZUA1|A3ZUA1_9PLAN ;
ALN/Q_length_ratio=0.370 ; DESCRIPTION=Uncharacterized
protein OS=Blastopirellula marina DSM 3645
GN=DSM3645_21729 PE=4 SV=1 ; EVALUE=7e-43 ;
Q/S_length_ratio=1.583"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M5T6U6|M5T6U6_9PLAN ;
ALN/Q_length_ratio=0.370 ; DESCRIPTION=Uncharacterized
protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_02895 PE=4
SV=1 ; EVALUE=2e-42 ; Q/S_length_ratio=1.306"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|F0SNH7|F0SNH7_PLABD ;
ALN/Q_length_ratio=0.380 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces brasiliensis (strain ATCC 49424 /
DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
GN=Plabr_0181 PE=4 SV=1 ; EVALUE=2e-42 ;
Q/S_length_ratio=1.495"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A6CDR4|A6CDR4_9PLAN ;
ALN/Q_length_ratio=0.419 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_08429
PE=4 SV=1 ; EVALUE=2e-40 ; Q/S_length_ratio=1.472"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|L0DGG0|L0DGG0_SINAD ;
ALN/Q_length_ratio=0.443 ; DESCRIPTION=RNA polymerase
sigma factor, sigma-70 family OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_4264 PE=4 SV=1 ; EVALUE=5e-38 ;
Q/S_length_ratio=1.389"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|F2AL81|F2AL81_RHOBT ;
ALN/Q_length_ratio=0.401 ; DESCRIPTION=Uncharacterized
protein OS=Rhodopirellula baltica WH47 GN=RBWH47_04539
PE=4 SV=1 ; EVALUE=2e-36 ; Q/S_length_ratio=1.419"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|L7C9W2|L7C9W2_RHOBT ;
ALN/Q_length_ratio=0.401 ; DESCRIPTION=Uncharacterized
protein OS=Rhodopirellula baltica SWK14 GN=RBSWK_05477
PE=4 SV=1 ; EVALUE=3e-36 ; Q/S_length_ratio=1.419"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|K5E6M8|K5E6M8_RHOBT ;
ALN/Q_length_ratio=0.401 ; DESCRIPTION=Uncharacterized
protein OS=Rhodopirellula baltica SH28 GN=RBSH_03251 PE=4
SV=1 ; EVALUE=4e-36 ; Q/S_length_ratio=1.360"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M2AVX0|M2AVX0_9PLAN ;
ALN/Q_length_ratio=0.401 ; DESCRIPTION=Uncharacterized
protein OS=Rhodopirellula europaea 6C GN=RE6C_05133 PE=4
SV=1 ; EVALUE=6e-36 ; Q/S_length_ratio=1.419"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M5RX03|M5RX03_9PLAN ;
ALN/Q_length_ratio=0.401 ; DESCRIPTION=Uncharacterized
protein OS=Rhodopirellula europaea SH398 GN=RESH_05526
PE=4 SV=1 ; EVALUE=7e-36 ; Q/S_length_ratio=1.419"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q7UII0|Q7UII0_RHOBA ;
ALN/Q_length_ratio=0.401 ; DESCRIPTION=Putative
uncharacterized protein OS=Rhodopirellula baltica (strain
SH1) GN=RB12516 PE=4 SV=1 ; EVALUE=1e-35 ;
Q/S_length_ratio=1.135"
/note="Pfam_scan:hit_1 (37..103);
Pfam:PF04542.9:Sigma70_r2;
Pfam_type:Domain;HMM_aln_Length:66; HMM_Length:71;
EVALUE:6e-05; BITSCORE: 22.5"
/note="Pfam_scan:hit_2 (126..179);
Pfam:PF08281.7:Sigma70_r4_2;
Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54;
EVALUE:6.6e-06; BITSCORE: 25.5"
/note="Pfam_scan:hit_3 (369..491);
Pfam:PF13485.1:Peptidase_MA_2;
Pfam_type:Domain;HMM_aln_Length:90; HMM_Length:128;
EVALUE:5.8e-10; BITSCORE: 39.2"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0000988"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0006810"
/note="GO_domain:GO:0005622"
BEGIN
1 MPVSILKLCP AAEVIASDAD LLTRFTTNRD EGAFAELVRR HGPVVQRVCR RLVPAHADDA
61 FQAVFLVLAC RPERVRKPGA IGSWLVGVTG RVARQMRNSE RSRAGHEQAA GQPEAANPLP
121 DTRELAAILD DELTQLPDGL RAPVVLCLIR GRTHAQAAAD LGGSVRTLRR RLDRAKELLR
181 ARLERRGVIP TVATALVAGV GEAITAVEPE IARRTVSNVF QFLAGGAPTT VATVAAKGVV
241 NDMARFKLPA LVATAAGALV CFGVVWSQDP LKPVDPAVQP PLRIEPPPAL VPSSLGKGYV
301 PQADVHTANF VVHAQTPVIA RAIAAEAEHQ RRVLALHWLG KELPAWSKPC VIRFALGQAS
361 GGATTFTFGN GANEVPTVTS MEMTLSGEFL VVMTNALPHE VTHTVLASFF GKPLPRWADE
421 GLSLLAESAT EQFNHDVRVR ELLNAGRGIR LRVLVRMTEY PKDMIVLYAQ GHSLTRFLAG
481 QTKGVPVLKD VPMLGDLFKK NADNEGRRRL LTFLHVGTQG NTVESWDKAA KEVYGFESID
541 DLEEAWLEWL KKPISALQQP PDSNPRATNP KPDSLHQIPP TELPLPRGW
//