LOCUS VTR94661.1 589 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : Uncharacterized protein OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_0849 PE= 4 SV=1: Sigma70_r2: Sigma70_r4_2: Peptidase_MA_2 protein. ACCESSION LR593886-3962 PROTEIN_ID VTR94661.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_30530" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|E8R2F4|E8R2F4_ISOPI ; ALN/Q_length_ratio=0.445 ; DESCRIPTION=Uncharacterized protein OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_0849 PE=4 SV=1 ; EVALUE=9e-49 ; Q/S_length_ratio=1.673" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DK84|L0DK84_SINAD ; ALN/Q_length_ratio=0.363 ; DESCRIPTION=Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5098 PE=4 SV=1 ; EVALUE=4e-47 ; Q/S_length_ratio=2.181" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|M5TSN3|M5TSN3_9PLAN ; ALN/Q_length_ratio=0.396 ; DESCRIPTION=Uncharacterized protein OS=Rhodopirellula sallentina SM41 GN=RSSM_06470 PE=4 SV=1 ; EVALUE=2e-44 ; Q/S_length_ratio=1.416" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|D2R4Q6|D2R4Q6_PIRSD ; ALN/Q_length_ratio=0.375 ; DESCRIPTION=Uncharacterized protein OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_2453 PE=4 SV=1 ; EVALUE=8e-44 ; Q/S_length_ratio=1.264" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|A3ZUA1|A3ZUA1_9PLAN ; ALN/Q_length_ratio=0.370 ; DESCRIPTION=Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_21729 PE=4 SV=1 ; EVALUE=7e-43 ; Q/S_length_ratio=1.583" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|M5T6U6|M5T6U6_9PLAN ; ALN/Q_length_ratio=0.370 ; DESCRIPTION=Uncharacterized protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_02895 PE=4 SV=1 ; EVALUE=2e-42 ; Q/S_length_ratio=1.306" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|F0SNH7|F0SNH7_PLABD ; ALN/Q_length_ratio=0.380 ; DESCRIPTION=Uncharacterized protein OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_0181 PE=4 SV=1 ; EVALUE=2e-42 ; Q/S_length_ratio=1.495" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|A6CDR4|A6CDR4_9PLAN ; ALN/Q_length_ratio=0.419 ; DESCRIPTION=Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_08429 PE=4 SV=1 ; EVALUE=2e-40 ; Q/S_length_ratio=1.472" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.443 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=5e-38 ; Q/S_length_ratio=1.389" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|F2AL81|F2AL81_RHOBT ; ALN/Q_length_ratio=0.401 ; DESCRIPTION=Uncharacterized protein OS=Rhodopirellula baltica WH47 GN=RBWH47_04539 PE=4 SV=1 ; EVALUE=2e-36 ; Q/S_length_ratio=1.419" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L7C9W2|L7C9W2_RHOBT ; ALN/Q_length_ratio=0.401 ; DESCRIPTION=Uncharacterized protein OS=Rhodopirellula baltica SWK14 GN=RBSWK_05477 PE=4 SV=1 ; EVALUE=3e-36 ; Q/S_length_ratio=1.419" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|K5E6M8|K5E6M8_RHOBT ; ALN/Q_length_ratio=0.401 ; DESCRIPTION=Uncharacterized protein OS=Rhodopirellula baltica SH28 GN=RBSH_03251 PE=4 SV=1 ; EVALUE=4e-36 ; Q/S_length_ratio=1.360" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|M2AVX0|M2AVX0_9PLAN ; ALN/Q_length_ratio=0.401 ; DESCRIPTION=Uncharacterized protein OS=Rhodopirellula europaea 6C GN=RE6C_05133 PE=4 SV=1 ; EVALUE=6e-36 ; Q/S_length_ratio=1.419" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|M5RX03|M5RX03_9PLAN ; ALN/Q_length_ratio=0.401 ; DESCRIPTION=Uncharacterized protein OS=Rhodopirellula europaea SH398 GN=RESH_05526 PE=4 SV=1 ; EVALUE=7e-36 ; Q/S_length_ratio=1.419" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|Q7UII0|Q7UII0_RHOBA ; ALN/Q_length_ratio=0.401 ; DESCRIPTION=Putative uncharacterized protein OS=Rhodopirellula baltica (strain SH1) GN=RB12516 PE=4 SV=1 ; EVALUE=1e-35 ; Q/S_length_ratio=1.135" /note="Pfam_scan:hit_1 (37..103); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:66; HMM_Length:71; EVALUE:6e-05; BITSCORE: 22.5" /note="Pfam_scan:hit_2 (126..179); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54; EVALUE:6.6e-06; BITSCORE: 25.5" /note="Pfam_scan:hit_3 (369..491); Pfam:PF13485.1:Peptidase_MA_2; Pfam_type:Domain;HMM_aln_Length:90; HMM_Length:128; EVALUE:5.8e-10; BITSCORE: 39.2" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0006810" /note="GO_domain:GO:0005622" BEGIN 1 MPVSILKLCP AAEVIASDAD LLTRFTTNRD EGAFAELVRR HGPVVQRVCR RLVPAHADDA 61 FQAVFLVLAC RPERVRKPGA IGSWLVGVTG RVARQMRNSE RSRAGHEQAA GQPEAANPLP 121 DTRELAAILD DELTQLPDGL RAPVVLCLIR GRTHAQAAAD LGGSVRTLRR RLDRAKELLR 181 ARLERRGVIP TVATALVAGV GEAITAVEPE IARRTVSNVF QFLAGGAPTT VATVAAKGVV 241 NDMARFKLPA LVATAAGALV CFGVVWSQDP LKPVDPAVQP PLRIEPPPAL VPSSLGKGYV 301 PQADVHTANF VVHAQTPVIA RAIAAEAEHQ RRVLALHWLG KELPAWSKPC VIRFALGQAS 361 GGATTFTFGN GANEVPTVTS MEMTLSGEFL VVMTNALPHE VTHTVLASFF GKPLPRWADE 421 GLSLLAESAT EQFNHDVRVR ELLNAGRGIR LRVLVRMTEY PKDMIVLYAQ GHSLTRFLAG 481 QTKGVPVLKD VPMLGDLFKK NADNEGRRRL LTFLHVGTQG NTVESWDKAA KEVYGFESID 541 DLEEAWLEWL KKPISALQQP PDSNPRATNP KPDSLHQIPP TELPLPRGW //