LOCUS VTR92258.1 264 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana AP endonuclease, family 2 OS=Caldanaerobacter
subterraneus subsp. pacificus DSM 12653 GN=CDSM653_704
PE=4 SV=1: AP_endonuc_2 protein.
ACCESSION LR593886-1559
PROTEIN_ID VTR92258.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_54560"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|B7R6C1|B7R6C1_9THEO ;
ALN/Q_length_ratio=1.053 ; DESCRIPTION=AP endonuclease,
family 2 OS=Caldanaerobacter subterraneus subsp. pacificus
DSM 12653 GN=CDSM653_704 PE=4 SV=1 ; EVALUE=4e-45 ;
Q/S_length_ratio=0.936"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|E0IAA3|E0IAA3_9BACL ;
ALN/Q_length_ratio=1.087 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Paenibacillus curdlanolyticus
YK9 GN=PaecuDRAFT_2592 PE=4 SV=1 ; EVALUE=6e-39 ;
Q/S_length_ratio=0.892"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|K6E752|K6E752_9BACI ;
ALN/Q_length_ratio=1.083 ; DESCRIPTION=Xylose isomerase
domain-containing protein OS=Bacillus bataviensis LMG
21833 GN=BABA_11796 PE=4 SV=1 ; EVALUE=9e-39 ;
Q/S_length_ratio=0.895"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|R9L7M3|R9L7M3_9BACL ;
ALN/Q_length_ratio=1.080 ; DESCRIPTION=Uncharacterized
protein OS=Paenibacillus barengoltzii G22 GN=C812_03348
PE=4 SV=1 ; EVALUE=2e-38 ; Q/S_length_ratio=0.904"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|C6IYB1|C6IYB1_9BACL ;
ALN/Q_length_ratio=1.080 ; DESCRIPTION=AP endonuclease,
family 2 OS=Paenibacillus sp. oral taxon 786 str. D14
GN=POTG_01188 PE=4 SV=1 ; EVALUE=3e-38 ;
Q/S_length_ratio=0.895"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D2R578|D2R578_PIRSD ;
ALN/Q_length_ratio=0.985 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Pirellula staleyi (strain
ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_0651 PE=4 SV=1
; EVALUE=4e-38 ; Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F4A2G5|F4A2G5_MAHA5 ;
ALN/Q_length_ratio=1.064 ; DESCRIPTION=Xylose isomerase
domain-containing protein TIM barrel OS=Mahella
australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON)
GN=Mahau_2056 PE=4 SV=1 ; EVALUE=1e-37 ;
Q/S_length_ratio=0.933"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A089NZJ0|A0A089NZJ0_9BACL ;
ALN/Q_length_ratio=1.114 ; DESCRIPTION=Xylose isomerase
OS=Paenibacillus odorifer GN=PODO_15165 PE=4 SV=1 ;
EVALUE=2e-37 ; Q/S_length_ratio=0.889"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|W4DGZ6|W4DGZ6_9BACL ;
ALN/Q_length_ratio=1.114 ; DESCRIPTION=Xylose isomerase
domain-containing protein OS=Paenibacillus sp. FSL H8-237
GN=C171_04415 PE=4 SV=1 ; EVALUE=2e-37 ;
Q/S_length_ratio=0.889"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|V9GGS9|V9GGS9_9BACL ;
ALN/Q_length_ratio=1.098 ; DESCRIPTION=Uncharacterized
protein OS=Paenibacillus sp. JCM 10914 GN=JCM10914_4122
PE=4 SV=1 ; EVALUE=4e-37 ; Q/S_length_ratio=0.886"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|R5H532|R5H532_9FIRM ;
ALN/Q_length_ratio=1.053 ; DESCRIPTION=AP endonuclease
family 2 OS=Firmicutes bacterium CAG:24 GN=BN555_00414
PE=4 SV=1 ; EVALUE=5e-37 ; Q/S_length_ratio=0.943"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|R5ADL4|R5ADL4_9CLOT ;
ALN/Q_length_ratio=1.057 ; DESCRIPTION=Xylose isomerase
domain-containing protein TIM barrel OS=Clostridium sp.
CAG:1013 GN=BN452_01397 PE=4 SV=1 ; EVALUE=6e-37 ;
Q/S_length_ratio=0.943"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|R6HWZ7|R6HWZ7_9FIRM ;
ALN/Q_length_ratio=1.034 ; DESCRIPTION=AP endonuclease
family 2 OS=Ruminococcus sp. CAG:177 GN=BN517_01587 PE=4
SV=1 ; EVALUE=7e-37 ; Q/S_length_ratio=0.946"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A090ZMP7|A0A090ZMP7_PAEMA ;
ALN/Q_length_ratio=1.083 ; DESCRIPTION=Xylose
isomerase-like TIM barrel family protein OS=Paenibacillus
macerans GN=DJ90_3692 PE=4 SV=1 ; EVALUE=1e-36 ;
Q/S_length_ratio=0.901"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|R6YRI1|R6YRI1_9FIRM ;
ALN/Q_length_ratio=1.049 ; DESCRIPTION=Xylose isomerase
domain-containing protein TIM barrel OS=Firmicutes
bacterium CAG:94 GN=BN815_02340 PE=4 SV=1 ; EVALUE=2e-36 ;
Q/S_length_ratio=0.943"
/note="Pfam_scan:hit_1 (21..218);
Pfam:PF01261.19:AP_endonuc_2;
Pfam_type:Domain;HMM_aln_Length:211; HMM_Length:213;
EVALUE:2.7e-24; BITSCORE: 85.6"
BEGIN
1 MKPLKIGIVV ESTQLSLRQA IESAARMGAR GIQVDATGDL APDALGATGR REFRNLLRSF
61 DLELAALNVP VRRGLDVAAD LQPRLERVRK TMQLAFDLGA RRVVVACPKL PEDAASPRAQ
121 LMRESLLALG GYGDRVGSFV ALEIGYDPAE KVKEYLAGFG VGSLKVTYDP ANFLLHGHDP
181 LANLMPLEGL VSHVHARDAR SAGVSRGLQE VPLGAGDIDW MALTATLQVL EFDGFLTVER
241 EQGEHKLADV TNGVKFLKRF ALPV
//