LOCUS VTR92258.1 264 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana AP endonuclease, family 2 OS=Caldanaerobacter subterraneus subsp. pacificus DSM 12653 GN=CDSM653_704 PE=4 SV=1: AP_endonuc_2 protein. ACCESSION LR593886-1559 PROTEIN_ID VTR92258.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_54560" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|B7R6C1|B7R6C1_9THEO ; ALN/Q_length_ratio=1.053 ; DESCRIPTION=AP endonuclease, family 2 OS=Caldanaerobacter subterraneus subsp. pacificus DSM 12653 GN=CDSM653_704 PE=4 SV=1 ; EVALUE=4e-45 ; Q/S_length_ratio=0.936" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|E0IAA3|E0IAA3_9BACL ; ALN/Q_length_ratio=1.087 ; DESCRIPTION=Xylose isomerase domain protein TIM barrel OS=Paenibacillus curdlanolyticus YK9 GN=PaecuDRAFT_2592 PE=4 SV=1 ; EVALUE=6e-39 ; Q/S_length_ratio=0.892" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|K6E752|K6E752_9BACI ; ALN/Q_length_ratio=1.083 ; DESCRIPTION=Xylose isomerase domain-containing protein OS=Bacillus bataviensis LMG 21833 GN=BABA_11796 PE=4 SV=1 ; EVALUE=9e-39 ; Q/S_length_ratio=0.895" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|R9L7M3|R9L7M3_9BACL ; ALN/Q_length_ratio=1.080 ; DESCRIPTION=Uncharacterized protein OS=Paenibacillus barengoltzii G22 GN=C812_03348 PE=4 SV=1 ; EVALUE=2e-38 ; Q/S_length_ratio=0.904" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|C6IYB1|C6IYB1_9BACL ; ALN/Q_length_ratio=1.080 ; DESCRIPTION=AP endonuclease, family 2 OS=Paenibacillus sp. oral taxon 786 str. D14 GN=POTG_01188 PE=4 SV=1 ; EVALUE=3e-38 ; Q/S_length_ratio=0.895" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|D2R578|D2R578_PIRSD ; ALN/Q_length_ratio=0.985 ; DESCRIPTION=Xylose isomerase domain protein TIM barrel OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_0651 PE=4 SV=1 ; EVALUE=4e-38 ; Q/S_length_ratio=1.015" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|F4A2G5|F4A2G5_MAHA5 ; ALN/Q_length_ratio=1.064 ; DESCRIPTION=Xylose isomerase domain-containing protein TIM barrel OS=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) GN=Mahau_2056 PE=4 SV=1 ; EVALUE=1e-37 ; Q/S_length_ratio=0.933" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|A0A089NZJ0|A0A089NZJ0_9BACL ; ALN/Q_length_ratio=1.114 ; DESCRIPTION=Xylose isomerase OS=Paenibacillus odorifer GN=PODO_15165 PE=4 SV=1 ; EVALUE=2e-37 ; Q/S_length_ratio=0.889" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|W4DGZ6|W4DGZ6_9BACL ; ALN/Q_length_ratio=1.114 ; DESCRIPTION=Xylose isomerase domain-containing protein OS=Paenibacillus sp. FSL H8-237 GN=C171_04415 PE=4 SV=1 ; EVALUE=2e-37 ; Q/S_length_ratio=0.889" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|V9GGS9|V9GGS9_9BACL ; ALN/Q_length_ratio=1.098 ; DESCRIPTION=Uncharacterized protein OS=Paenibacillus sp. JCM 10914 GN=JCM10914_4122 PE=4 SV=1 ; EVALUE=4e-37 ; Q/S_length_ratio=0.886" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|R5H532|R5H532_9FIRM ; ALN/Q_length_ratio=1.053 ; DESCRIPTION=AP endonuclease family 2 OS=Firmicutes bacterium CAG:24 GN=BN555_00414 PE=4 SV=1 ; EVALUE=5e-37 ; Q/S_length_ratio=0.943" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|R5ADL4|R5ADL4_9CLOT ; ALN/Q_length_ratio=1.057 ; DESCRIPTION=Xylose isomerase domain-containing protein TIM barrel OS=Clostridium sp. CAG:1013 GN=BN452_01397 PE=4 SV=1 ; EVALUE=6e-37 ; Q/S_length_ratio=0.943" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|R6HWZ7|R6HWZ7_9FIRM ; ALN/Q_length_ratio=1.034 ; DESCRIPTION=AP endonuclease family 2 OS=Ruminococcus sp. CAG:177 GN=BN517_01587 PE=4 SV=1 ; EVALUE=7e-37 ; Q/S_length_ratio=0.946" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|A0A090ZMP7|A0A090ZMP7_PAEMA ; ALN/Q_length_ratio=1.083 ; DESCRIPTION=Xylose isomerase-like TIM barrel family protein OS=Paenibacillus macerans GN=DJ90_3692 PE=4 SV=1 ; EVALUE=1e-36 ; Q/S_length_ratio=0.901" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|R6YRI1|R6YRI1_9FIRM ; ALN/Q_length_ratio=1.049 ; DESCRIPTION=Xylose isomerase domain-containing protein TIM barrel OS=Firmicutes bacterium CAG:94 GN=BN815_02340 PE=4 SV=1 ; EVALUE=2e-36 ; Q/S_length_ratio=0.943" /note="Pfam_scan:hit_1 (21..218); Pfam:PF01261.19:AP_endonuc_2; Pfam_type:Domain;HMM_aln_Length:211; HMM_Length:213; EVALUE:2.7e-24; BITSCORE: 85.6" BEGIN 1 MKPLKIGIVV ESTQLSLRQA IESAARMGAR GIQVDATGDL APDALGATGR REFRNLLRSF 61 DLELAALNVP VRRGLDVAAD LQPRLERVRK TMQLAFDLGA RRVVVACPKL PEDAASPRAQ 121 LMRESLLALG GYGDRVGSFV ALEIGYDPAE KVKEYLAGFG VGSLKVTYDP ANFLLHGHDP 181 LANLMPLEGL VSHVHARDAR SAGVSRGLQE VPLGAGDIDW MALTATLQVL EFDGFLTVER 241 EQGEHKLADV TNGVKFLKRF ALPV //